Xenopus tropicalis (tropical clawed frog): 734030
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Entry
734030 CDS
T01011
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
734030 (lrba)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Others
Others
734030 (lrba)
Endosome - Golgi transport
734030 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
734030 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Tti2
SUKH_6
TPR_TTI1_C
WDR90_beta-prop_4th
NopRA1
Motif
Other DBs
NCBI-GeneID:
734030
NCBI-ProteinID:
XP_002933545
Xenbase:
XB-GENE-951020
UniProt:
A0A8J0QNC3
LinkDB
All DBs
Position
1:56572752..56914569
Genome browser
AA seq
2809 aa
AA seq
DB search
MAAQEKQVHPTGEEKSAKAEGPDPGGALALGPSVPIRGIRMKFAVLSGLLEVGEVSTRDL
VDTVFNLLVGGQFDLEMNFIIQEAESIICMIELLDKCDVTCQAEIWSIFSAILKKSIRNL
LICTEVGLVEHVLKRIDKVDSMIADLLVEMLGILASYSITVRELKLFFSKLRGEKGQWPP
QAAKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPVAKWPYQNGFTFHTWLRMDPINNI
NVDKAKPYLYCFRTNKGLGYSAHFVGSCLIVTSVKSKGKGFQHCVKYDFKPQKWYMVSLV
HIYNRWKNSELRCYVNGELASYGEITWLVNTSDTFDKCFLGSSETADSNRVFCGQMAAVY
LFSEALNAAQIFAVYQLGPGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSSIAFTYNPRA
TDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPVFAQLDF
RQYGSDHVDASVCSTLFAFILELLKNSLAMQEQMLSSKGFLVIGYSLEKSSKSHVTRTVL
ELSLAFAKYLSSLHNGVPLLKQLCDHILLNPAIWIHTPATVQLALYTFMSTEFISSVSIY
NAVRRTGTVLLVMHTLKYYYWTVNPQDRSGITPKGLDGPRPNPKEILSLRAMLLIFIKQL
VMKDHGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRNGLRIVY
KLLASKTEGIRVQALKVLGYFLKHLSAKRKSEVMQAHGLFSLLAERLMLHTNLITMTTYN
VLFEILIEQICTQVIHKQHPDPDSTVKIQNPLILKVIATLLRNCPQHPEVIEVKRVFLSD
MIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNTEEQKITEMVYAIFRILLYHAVKYE
WGGWRVWVDTISITHSKVTFEMHRESLARVFNEYQDRDGGEICPSPSSPIRTVSGISAEL
ESRTQTPPLEITEAASTSTFIENVVTESTADFEVTQFSEHISSPKTEQMEPDESDDYVEV
TLDTNMSDAEETETKEQSIEGTVPSALVEECEEATLSLDTNSCDFVPIGCSEDNEGISEM
LESKMNVGSSAVVLDSSDSAPDNTVPTASENSAVSDELSAMVNDAAGSNEAVSELGENKG
DGPPVDPQDQKSDGKSNSSENTTAEAIPTLKEVAETQNLDIEGAVGGITSPKESEIKTNA
LAASQVSERKIAKLDVSSIASDTENLDYRRSVSHEADQTTGAMPEKIRQPAGADGQRRDS
RSTMFRIPEFRWSTMHQRLLTDLLFSIETDIQMWRSHSTKTIMDFVNSNDNVIFVHNTIH
LISQITDNMIMACGGILPLLSAATSATHELEHIEPTQGLSLETSISFLQRAISLVDVLIF
ASSLGFADIEAEKNMSPGGILRQCLRLVCAVAVRNCLECQQHLKLKTTGEPIKNQKGVHS
LVGTGKPAAKSPIDIITGGMSPVRDHDRLLQDMDINRLRAVVFRDVEDSKQAQFLALAVV
YFISVLMVSKYRDILEPQNERKQSTRTPKDAEHESGDMGSLDAVQSVAPVTADMENALSI
RRDSGIGEESAIAPTRTSDESAVAPTKSSDAVSDTGPEPVSSGPDAISEVLHTLSSEVIQ
SSQESGSEASAKNVNVKDILRSLVSIPSDEPLTDPALLPPAFLGALGDLAAENPVQFRSF
DRSVVIAQKKSVPPIPATVSTAPHAVSVVSATDSSQAADADRESSGSGSSNSKLPSVQTV
ASVPEDSASHMSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVC
MKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFIL
SRQRAEEIHRHAEFESQCAQYTADKREEEKMCDHLIRAAKYRDNVTATQLVQKIINILTD
KHGAWGSSSISRPCEFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLRSAIEHDPDEDALV
KGKQSIKGQVVGGQISEGDSLLDGEDDTLSSLEEKDLESLTGPVNLSTPAQLVAPSVVLK
GTLSVTSSELYFEVEEDDPGFKKMDAKILAYTEGLHGKWLFTEIRAVFSRRYLLQNTAVE
IFMANRVSVMFNFPDQSTVKKVIHCLPRVGIGTNFGLPQTRRISLATPKQIFKASNMTQR
WQHREISNFEYLMFLNTIAGRTFNDLNQYPVFPWVITNYESEQLDLTLPSNFRDLSKPIG
ALNPKRADFFDERYKSWEDDQVPKFHYGTHYSTASFVLSWLLRIEPFTTFFLNLQGGKFD
HADRAFSSIARAWRNSQRDTSDIKELIPEFYYLPEMFVNANNYSLGVMDDGTVVSDVDLP
PWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNMFYYLTYEGAVN
LSSITDPVLREGVEAQIRSFGQTPSQLLIEPHPPRSSAMQVTPLMFTDQAQHDVIMVLKF
PSNSPITHVAANTQPGLATPAAITVTANRLFAVNKWHGLPAHQGAVQDQPYQLPVEIDPL
IASNTGMHRRQISDLLDQSIQVHSQCFVITADNRFILVCGFWDKSFRVYSTDTGKLTQVV
FGHWDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKSNGIGDHPSTEFATPRAILT
GHDCAITCATVCAELGLVISGSKDGPCLIHSMNGDLLRTLEAAENCLRPKLIQVSREGHC
VVYYEKGIFCVFSINGKLQASMEIEDNTRAILLSRDGQYLLTGGDNGVVMVWQVSDLKQL
FAYPGCDAGIRSMTMSFDQRCIMTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggagaagcaggtgcacccaacaggtgaagagaagagcgctaaggcggag
ggccctgacccaggaggggcgctggcattaggaccgagcgtacctattagagggatccgc
atgaagtttgcggtgctgagcgggctgctggaggtcggagaagtcagcaccagggacttg
gtagacaccgtgttcaatttgcttgtgggaggccagtttgatctggagatgaatttcatc
atccaagaagcagaaagcataatctgcatgatcgaactactggacaaatgtgatgttacg
tgtcaggcagaaatatggagcattttctctgcaatcttaaagaaaagcattcgtaatttg
ttgatctgcactgaagttggtttggttgaacatgtcctcaaaagaattgataaagttgac
agcatgattgcagatctcttggtggaaatgctgggaattttggccagctacagcatcaca
gttcgagaacttaaactttttttcagcaagcttcgaggagaaaaaggacagtggcctcct
caagcagcaaaattgctgtcagtcttaaagcacatgcctcagaaatatggtcctgatgcc
ttttttaactttccagggaaaagtgctgcagcaattgccttacctccagtggctaaatgg
ccgtatcaaaatgggttcacgtttcatacttggttaaggatggatccaataaacaacatc
aatgtggataaagctaaaccctatttatattgttttagaacaaataaaggacttggttat
tcagctcattttgttggtagctgcttaattgtcacatcagtaaagtccaaaggaaaagga
ttccagcactgcgtgaagtatgatttcaagccacagaagtggtatatggtatcacttgtc
cacatttacaatcgatggaaaaacagtgagctgcgatgttacgtaaatggagaattggct
tcctatggagagataacatggcttgttaatacaagtgatacttttgacaagtgcttccta
gggtcatctgagacagctgattctaatagagtgttctgtgggcagatggctgctgtctac
ctatttagtgaagccctaaatgccgctcagatatttgcagtctatcagttgggccctgga
tacaagggaacatttaaattcaaggcagaaagtgatctctttcttgcagagcaccataag
ttgttactgtatgatggcaaattgtcaagctcaattgctttcacatataacccaagagct
actgatgcccagctttgcctggaatcatctcccaaagataacccatctatctttgttcat
tctcctcatgcacttatgctgcaggatgtgaaagcagttttaacacactcaattcaaagt
gcaatgcactcaataggaggagtacaggttcttttccctgtctttgctcaactggatttt
cggcaatacgggtcagatcatgtagacgcttcagtctgttcaactctctttgccttcatt
ttggagttgctgaaaaactcccttgctatgcaagaacagatgctatcttcaaagggcttc
cttgtgataggatatagtcttgaaaagtcttccaaatctcatgtcactagaacagtcctt
gagctgagtttggcctttgcaaaatacttgagtagcttgcacaatggggtacctttgctc
aagcagttgtgtgaccatattctgcttaacccagcaatatggattcataccccagccacg
gttcagctggctttgtacacattcatgtctacagagttcatcagctcagttagcatctac
aatgctgtccgtagaactggcactgttctcttggtgatgcacaccttaaagtattactat
tggactgttaaccctcaggatcgtagtggcatcactccaaaaggcttggatggaccacgg
cctaatccaaaagaaatactgtctctcagagcaatgctgttgatatttattaagcaatta
gtcatgaaggatcatggtgtaaaagaagatgaattacaggcaattctaaattatttgctg
acaattcatgaggatgacaatttaatggatgttctgcagcttcttgttgcactgatgtct
gaacaccctggctcaatgattcctgcatttgatcaacgaaatgggctacggattgtttac
aagcttctggcatcgaagactgaaggaataagggttcaagctttgaaagtcttgggctac
tttttgaagcacttatcggcaaagagaaaatctgaagtcatgcaggcccatggactcttt
tctctgctagctgaaagacttatgctgcacacaaatctaataacaatgacgacctacaat
gtgctatttgagattctcattgagcagatatgtacccaggtgatacataaacaacatcct
gatccagattcgacagtcaagatccaaaatcccttgatactgaaagttatagcgaccctc
ctgcggaactgtcctcagcacccagaagtcatagaagtaaaacgagtgtttctttcagac
atgataaagctctttaataacagccgggaaaatcgaaggagcttgctgcagtgctctgtc
tggcaggagtggatgctgtccctctgctacttcaaccctaagaacacagaggagcagaaa
attacagagatggtgtacgccatctttcgaattcttctttatcatgcagtcaaatatgag
tggggaggttggcgtgtttgggtggacacaatctcaatcactcattcaaaggttactttt
gaaatgcacagagaaagtttggcacgtgtgtttaatgaatatcaggatagagatggtggt
gaaatatgtcctagtccttcaagcccaataagaactgtttctggaatcagtgcagaatta
gagtctagaactcagacaccacctttggaaatcacagaagctgcaagcacatctactttt
atagaaaatgttgtgactgaaagtacagcagactttgaagttacacaatttagtgagcac
atcagctcaccaaaaacagaacaaatggaaccagatgaaagtgacgattatgttgaggtt
acccttgatacaaatatgtctgatgcagaggagactgaaacaaaagaacaatccattgaa
gggactgttccttcagctttggttgaagagtgtgaggaagccacgttatctcttgatacc
aactcctgtgattttgtaccaatcgggtgctcagaggacaatgagggcatttctgaaatg
ctggaaagtaaaatgaatgtgggcagttctgctgttgtgttggacagttcagactctgca
ccagacaacacagtgccaactgcttcagaaaattctgctgtatcagatgaattatcagca
atggtaaatgatgcagcaggtagcaatgaagctgtctctgaactaggggaaaataaagga
gatggaccacctgtagatcctcaagatcagaaaagtgatggaaaaagtaattcttctgag
aataccactgcggaggctattcctactttaaaagaagttgcagaaactcagaatttggat
atagaaggagcagtgggaggtattaccagtccaaaggaaagtgaaataaaaacaaatgcc
cttgctgcttctcaggtttctgaaagaaaaatagcaaagcttgatgtttctagcattgct
tcagatacagaaaatctggattacaggcgcagtgtgagccatgaagctgaccagaccaca
ggagccatgcctgagaaaataagacaacctgccggagcagatggccaaagaagagattct
agaagcacaatgtttcgtattcctgaattcaggtggtcaactatgcatcagcggttgctc
acagaccttctgttttcaatagaaacagatatacagatgtggcgaagtcattctaccaag
actataatggactttgtgaatagcaatgataatgttatttttgtccataacactatccac
ctgatttctcaaataaccgacaatatgatcatggcttgtgggggtatattaccattgctt
tctgctgcaacttcagctacacatgaattagaacatattgagccaacacaaggcctgtca
ttagagacatctatttcatttctgcaacgagctattagcctagttgatgtcctcattttt
gcaagttctttgggcttcgctgatattgaagcagagaagaacatgtctcctggtggaata
ctaaggcagtgtcttcgattggtctgtgccgtagccgtaagaaattgtctggagtgtcag
cagcacttgaagttaaaaaccacaggagaacctataaaaaaccagaaaggagttcatagc
ttggtgggaacaggaaagcctgctgcaaagagccccattgatataattacaggaggaatg
tctccagtgcgagaccatgaccggcttctgcaagacatggatataaaccgtttaagagct
gtggttttcagagatgtagaggacagcaaacaagctcaatttctcgcacttgctgttgtt
tacttcatttcggttttaatggtatctaaatatcgagatatccttgagcctcaaaacgag
agaaagcaatccactagaactccaaaggatgctgaacatgaaagtggtgacatgggatct
ttagatgctgttcagtctgtagcgccagtcactgcagacatggaaaatgccttatctata
agaagggactctggcattggtgaagaatctgcaatagcccctaccagaacctctgatgaa
tctgctgtagcgccaacaaagagttctgatgcagtgtctgacacaggcccagagcctgtt
agttcaggaccggatgctattagtgaagttctgcacaccctatcctcggaagttatacag
tcctctcaggagagtggaagtgaagcatctgcaaaaaacgttaatgtgaaggacattctc
aggagtttagtgagcattccatctgatgagcccctgacagaccctgctttattgccacca
gccttccttggagcacttggtgatcttgcagctgaaaatccagtacagttccgatcattt
gacaggagtgttgttattgctcagaagaaatcagttcccccaataccagctactgttagt
actgctcctcacgcagttagtgtggtgtcagcgacggattcctcacaagctgcagatgct
gacagagaatcctctggcagtggatcatcaaattcaaaactgccttctgttcagactgtt
gcttctgtgccagaggactctgcttcacatatgagcattacagagagattggagcacgct
ctggagaaggctgctccactcctgagggaaatatttgtggattttgctccttttctgtct
cgcacacttttgggaagccatggccaagaattgcttattgaagggacaagtctggtttgt
atgaaatcgagcagctcagtagtagaacttgtcatgctgctatgttctcaggaatggcaa
aactctattcagaaaaatgcgggactggcatttattgaactggttaatgaaggaaggtta
ctaagccaaactatgaaagatcatctggtgagagtggcaaacgaagctgaatttatcttg
agcaggcagcgagcagaagagatacacagacatgcagaatttgagtcccaatgtgcacag
tatactgcagacaagagagaagaagaaaagatgtgtgaccatttgataagggctgcaaag
tatagagataatgtaactgcaacccagcttgtacagaaaattatcaatattctcacagac
aagcatggagcttggggtagctcttcaataagtcgtccttgtgagttctggcgccttgac
tactgggaagatgacttgaggcgccgacgacgatttgtgcggaacccccttggatcgaca
catcctgaagcaaccctcagatcagccatagagcacgatcctgatgaagatgcacttgtg
aaaggaaagcagtctatcaaaggtcaggttgttggaggacaaatctcggagggtgatagc
ctgctggatggagaggatgacacactgtcatccttagaagaaaaagatcttgaaagcctt
acaggtcctgttaaccttagcacccctgcacaattagtggctccttccgtggtgctaaag
ggcaccctgtccgtcacctcctctgagctctactttgaggtggaagaagatgatcctgga
tttaagaaaatggatgccaagatacttgcctacactgaaggattgcacggaaaatggctg
ttcacagagatccgtgctgttttttcacgtcgctaccttctgcaaaacacagctgtagag
atttttatggcaaacagagtttcagtcatgtttaacttccctgaccaatctactgtaaaa
aaagtaatccattgcctccccagagttggaattggcactaattttggattgcctcaaaca
aggcgtatctctttggctactccaaaacagatctttaaagcatcaaatatgacacagcgt
tggcagcacagagaaatctccaactttgaatatttgatgtttctgaacacaatagctggc
cgaactttcaatgacttgaaccagtatccagtgttcccctgggttataaccaattatgaa
tcagaacagctggaccttactcttcctagcaacttcagggatttgtccaagcccattgga
gcactaaacccaaagcgagctgacttctttgatgaacgttataaatcctgggaagatgac
caagttcccaagtttcattatggcacacattattcaactgcgagttttgtactaagctgg
ctgctgagaattgagccattcacaacatttttcctcaatctgcaaggtggtaaatttgac
cacgcagatcgggcattttcatccattgcaagagcatggagaaactctcagcgagacact
tctgatatcaaggaactcattcctgaattttactaccttcctgagatgtttgtgaacgcc
aataattacagtcttggagtaatggatgatggcactgtggtttctgatgtagatcttcca
ccatgggctaaatcccctgaagagtttgtccgcataaacagactggccttggaaagtgaa
tttgtttcctgccagctccaccaatggattgatcttatttttggctacaaacagcaagga
ccagaagcagtaagagctctaaatatgttttactacctgacgtatgaaggggctgtcaat
ctcagttcaattactgatcctgttttgagagagggagtggaagctcaaattcggagtttt
ggacaaacaccttcccagcttttaatcgagccgcatcctcccaggagttcagctatgcag
gtgactccactgatgtttacagaccaagctcagcatgatgtgatcatggtcctgaagttc
ccgtccaactcgccaatcactcacgttgcagccaacacccaacctgggctggctactcct
gccgcaattactgtcactgcaaacagactctttgctgtaaataaatggcacggtcttccc
gctcatcaaggtgctgtgcaggaccagccataccagctgcccgtggaaatcgatcctctt
atagccagcaatactgggatgcacaggagacaaatctctgaccttctagaccaaagcatc
caggtccactcacagtgttttgtcatcacagctgacaatcgctttattcttgtctgtggt
ttttgggacaaaagctttcgtgtttattcaacagacacaggtaaactgactcaggtggtg
tttggtcactgggatgttgtgacctgcttagctcgatccgaatcctacattggaggagat
tgctatgtgctgtccggatcaagagatgccaccttgctgctgtggtactggaatggcaaa
agcaacggcattggggatcatcccagcactgagtttgctactcctcgcgctatactaaca
ggacatgactgtgcaattacctgcgctactgtatgtgcggagcttggactagtgatcagt
ggttcaaaagatggtccatgtttgatacattctatgaatggagaccttttaaggaccttg
gaggctgcagaaaactgcttaagaccaaaacttatacaggtttcaagagaaggccactgt
gttgtctattatgaaaaaggcattttctgtgtttttagcatcaatggaaaacttcaagct
tccatggaaattgaagacaatacacgggcaattctgcttagtcgagatgggcagtacctg
ctgactggaggagacaatggagtcgtcatggtgtggcaggtatcagatctgaagcagctc
tttgcttacccaggctgcgatgcagggatccgatctatgaccatgtcttttgaccaaagg
tgcataatgactggcatggcctccggaagcattgtgctcttctacaatgacttcaaccgc
tggcaccacgaatatcagacgagatactga
DBGET
integrated database retrieval system
