Xenopus tropicalis (tropical clawed frog): 734040
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Entry
734040 CDS
T01011
Symbol
topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
734040 (topors)
03036 Chromosome and associated proteins [BR:
xtr03036
]
734040 (topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
734040 (topors)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
734040 (topors)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
734040 (topors)
UBL E3 ligases
734040 (topors)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
734040 (topors)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
734040 (topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
734040
NCBI-ProteinID:
XP_002940310
Xenbase:
XB-GENE-994244
UniProt:
F7DQA9
LinkDB
All DBs
Position
1:complement(115115568..115122415)
Genome browser
AA seq
1018 aa
AA seq
DB search
MREKRTKRRRPGARQEANDTMMASSSNNYSLDGSFSPQAGTSKLQNHGTATDASPDSKCP
ICLDRFDNVSHLDRCLHRFCFRCIQEWAKNKAECPLCKQPFYSIFHSVKAEDDFKEYVLR
PTMNGSFASPDGHRFRYRTTMSRDNHVAIRTLRSSSTQRTFSPPDNGILFEGFSNQNLHQ
RGEEIHQMIRRLASRRQASAEGRSMRQIQEQELINFRRALYRSGIRVRNIQDGGRYRDIS
AEFFRRNPACLHRLVPWLKRELTVLFGSHGSLVNIVQHIIMSNVTRYDMESQAFVEDLRP
FLLHRTDHFIHEFVNFARCPYNIEAYDQHANYDCPAPSYEEGSRSESSVITISPDEADTR
DPIIPSAGPGVGQTAWDDETPGPSYSTLEQASVAVSTTLDISESSDDEPPSIRQTSQEVS
NSEPTENLQDQSFPTDDCVIVGYVKPLAERTPELVELSSDSESSLSEVKTEDAKKPTIKP
FFLSDSSELSRSSSSLYTPAKEKRSRKTKGKTTSSKHSHSRKKEKGKCRLDLTSRKDKGD
LNSNYALSRWRDRSRSSDCYSRSSRNKSHNSRRRHCSKNNLKPRSPEKSRHKSRKGRKKS
SSRDRSLSWRSRTVSLTSESSRERCESSSRSRNRSRGRSRSHDSDNDFSSNNYRSSYQWE
YTYYSRNRDRDGYEQSYRRRTCGRGRYSRPSASPEYKIQSYSEKKDTRKERGYIASKQYR
RERYRSRSRSSSQMNTSGTEHTRSDKPSGKRKYKTHHLEKQEREGNNREVPSAKEKEGGL
QAGKTSLGNHTGSLKNDLMGSSSEPKQKLRKKARSPSVEIVYEGKAVEGAKHHKKKKKKK
HKKKRRREHTNSPAASPIIITIDSDSDTPMVEDLPCNDHSSLVPENKTSIDSTNFMHSQS
PPTSTTVSTTEVLSGERADSDSKASDLCSSNRHLDAATGILDGLHFDDSSDEQNLLPVQS
PPNIPDLCEVEPLAAESSLPESDPILDNVPPTSTSEISELHKSFAESIFDFDLLNNVT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaagagaaccaagcggcggaggccgggagcgaggcaagaagcgaatgacacg
atgatggcatcatcctctaacaattattcactagatggcagcttttcaccccaggctggc
acaagcaaactacaaaaccatggtactgcaacagatgcttccccagactcaaagtgtcca
atatgtttggacaggtttgataatgtgtcacatcttgatcgatgtctgcacagattttgt
ttccgttgcattcaagaatgggcaaaaaacaaagctgaatgccctctatgcaaacagccc
ttttactccattttccatagtgtcaaagcagaggatgattttaaagaatatgtcttgagg
cccacaatgaatggttcatttgccagtcctgatggacatagatttcgttatcgcacaact
atgagtagagacaatcatgtagccattcggacattaaggtcttcaagcactcaaaggaca
ttttcacctcctgacaatggaattttatttgaagggttttcaaatcagaatttacatcaa
agaggtgaagaaatccaccagatgataagaaggctagcctccagacgacaagccagtgca
gagggtcgttctatgaggcaaattcaagagcaagaactcattaacttcagaagagctttg
taccggtctggaatacgtgtgagaaacattcaggatggcggacgttatagagatatttct
gctgagttcttccggcgtaaccctgcttgtcttcatcggctagtaccatggttgaaaaga
gagttgactgttctctttggtagccatggttcccttgttaacattgtacagcatattatt
atgagtaatgtcacacgatatgatatggaaagtcaagcatttgttgaggatcttcgtcct
tttttgcttcaccgcacagaccatttcatacatgagtttgttaactttgcccgatgccct
tacaatattgaagcatatgatcagcatgcaaactatgattgtcctgctccttcatatgag
gaaggaagccgttcagagtcatctgtcatcacaatatcgccagatgaagcagataccaga
gatccaattattccttctgctggtcctggtgttggccagacagcttgggatgatgagacc
cctggtccctcttattccacacttgagcaagcctcagttgctgtatccactacactagat
atctcagaaagctcagacgatgagccacccagcataagacagacttcacaagaagtttcc
aacagtgaacccacagaaaacctgcaggatcagtcctttccaactgatgactgtgttata
gtagggtatgttaaaccactggcagaaagaactccagaattagttgaattgtcatccgac
tccgagagctcattgagtgaggttaagacagaagatgccaaaaagcctacgattaaacca
tttttcctaagtgacagtagtgaattgagcaggtcatcatcatctttgtacacacctgca
aaagaaaaacgttcacgcaaaaccaagggaaaaaccacatctagcaaacattcccattcc
aggaaaaaagagaagggaaaatgtcgacttgatttaacttctagaaaggataagggggat
ttgaacagtaattatgctttgtccagatggagggataggtcaaggagttctgattgttat
tctcgttcttctcgcaataaaagccacaacagtcgaaggaggcattgcagcaaaaataat
ttgaaacccaggagtcctgaaaagagcaggcataaaagtaggaaaggaaggaagaaatct
agtagtagggatcgaagtctgtcttggaggagtaggactgtgtcactaactagtgaaagc
tccagagagagatgcgagtcaagctctagaagccgaaatcgaagtaggggtaggtcacga
agtcatgatagtgacaatgatttttcttccaacaactatcgcagttcttatcaatgggaa
tatacctattacagtcgaaatcgggatagagatggctatgaacagtcctacaggagacgg
acttgtggtcgaggacgttattcaagaccctctgctagcccagaatataaaattcagtct
tactctgaaaagaaagatacaagaaaggagaggggatacattgctagtaaacaatatcgc
cgtgagcgatacaggtcaaggagtcgctcaagcagtcagatgaatacatcagggactgag
cataccagatctgacaaaccaagtggaaaaagaaaatacaaaacacaccatttggaaaag
caggaaagggaagggaacaatcgagaagttccttctgccaaagaaaaagagggaggtctg
caagcaggcaagacttctcttggcaatcatactggtagtctcaaaaatgatttaatgggt
tcatcctctgaacctaagcagaagttaagaaaaaaggcaagaagcccaagtgtggaaata
gtatatgagggcaaagcagttgaaggggcaaagcaccacaaaaagaagaagaaaaagaag
cacaagaaaaaacgacgcagggaacacactaattctccagctgcttctcccatcattatc
accattgacagtgacagtgacaccccaatggtggaggatctcccatgcaatgaccacagc
tccctggtacctgaaaacaaaactagtattgactcaactaacttcatgcacagccagtcg
ccacctacctcgaccacagtaagtaccacagaagtactaagtggagaaagggcagactct
gattccaaagcctctgatttatgttcaagtaacaggcacttagatgctgccactggaata
ctggatggtttacattttgatgatagctctgatgaacagaatctgctccctgtacaaagt
cctcctaacataccggatctctgtgaagtagaacctttagcagctgagagttccttgcca
gagtctgatcctatactggacaatgtaccacctacatcaacttcagaaatatctgaactt
cataaaagctttgctgagagtatatttgactttgatctcttaaacaatgtaacatag
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