Xenopus tropicalis (tropical clawed frog): 734043
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Entry
734043 CDS
T01011
Symbol
wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
734043 (wrn)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
734043 (wrn)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
734043 (wrn)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
734043 (wrn)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
734043 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
PTS_EIIB
Motif
Other DBs
NCBI-GeneID:
734043
NCBI-ProteinID:
XP_012810306
Xenbase:
XB-GENE-992875
UniProt:
A0A8J1JQP3
LinkDB
All DBs
Position
1:complement(97494429..97551116)
Genome browser
AA seq
1433 aa
AA seq
DB search
MTSLQRKLPEWMSVQQKEDSIDDKKKSLWKKNIVEDNLPYLKFNGSIVYSYEGNDCSLLS
EDIRSSLQEEDVLGFDIEWPPIYTKGKTGKVALIQVCVSEKKCYLFHISPMAGFPKGLRR
LLEDESVKKVGVGIEGDQWKLMSDYELKLKGFIELSEVANQKLRCKEKWSLNGLVKHLFK
KQLLKDSSIRCSNWDIFPLSTDQKLYAASDAYAGLLIYQKLECMDAHEKVSFCVSRVGVA
DFEGIKRQLTDLSNGFMDLVKDVPSSFGHSTGALRAVAILEDLSEKLEELRSIVKEASKG
EGNGLLCHDSEDCSEEDKYQSINLASKELLAENKIDYKNAESKNNKDVDCCQNENMKQDF
LGISEEELYMMERKDDEKQIKPGQKSNEHLYDTNEEKNMSYIIESDEEFESEIIKSLEDL
DNSIEEAIGTSVHQTGLIPAKSVDTVADEEEDEGIEEEDDDDDWDPSIPEPNAEQVSCLK
TYFGHSSFKPVQWKVIHSVLRERRDNLVVMATGYGKSLCYQFAPVYTSGIGIVICPLISL
MEDQVLQLEMSNIPSCFLGSAQSKNVLQDVKAGRMRVIYMTPEFCSGGISLLQDLDNRYG
ITLIAIDEAHCISEWGHDFRSAYRSLGSLKRMLPTVPIVALTATASPSIREDISKSLSLH
NPQITCTSFDRPNLYLDVAKKTTNISTDLQQFLIKKQGSGWEFEGATIVYCPTRKTSEQV
TAELTKLGIACGTYHAGMGIKQRRDVHHRFMRDEIQCVVATVAFGMGINKPDIRKVIHYG
APKEMESYYQEIGRAGRDGLPSCCHALWTQADINFNRHMLGEIPNNSFREYKLKMLTKME
KYLNSSNCRRKIILSHFEDKQLRKASSGIMGTEKCCDNCKTRLRFNISINDTEDNLQEFG
QQAYKFISAVDILGQKFGTGVPVLFLRGSTSQRLPDRFRHHPLFSCGKDQTEAFWKVLAR
QLISEGYLQESSGHTKFSTICGLTSKGTNWLMKASNQQHPSLLLPSNDELCLRRTTVSNS
ISRVPSHSSMIPHASPNTRSSIPKAGPEKISLKEKFSYQEAGKLSTAVDVSKSSSLKLQT
PCKPLQAAEPDVSPKEMELQTALYGRLVVARQKIASERDIPPAVLATNKVLVDMAKLRPT
TIENMKKLDGVSEAKSAMLAPLVEVVKEFCIANSLKMDIFSRSGSQSELTSSTQREQDST
TLPESQRMSYSLFQEQNLSLKKVADARCLSMAAVGMHLWQALKAGYSVDVQRAGLTPGIR
KLIIDNIKNPPINSDLSSFKAIRESIPANIDSYLIRMAIALLEKEESNGAQGQLDLPTQK
TLVKLEEQPKNISVENIKHKATMNNSLWIEKKPTQPTTAELEETKAKPLAPIMLASWNEP
SLDADTEELFSESQSYTTTPKRKLPQWFGPAKGNAGTNAVKKAKTGKKKGIFD
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgactagccttcagcgtaagcttccagagtggatgtccgttcaacagaaagaagacagt
atagatgataaaaagaaatctctctggaagaagaatattgtggaagataatttaccttac
ttgaaatttaatggctccattgtatacagctatgagggaaatgactgttctctgttgtct
gaagatatccgatcaagcttgcaagaagaggatgtacttggatttgatattgaatggccg
cctatttatacaaaggggaaaactggaaaagttgctcttattcaagtgtgtgtttctgag
aagaaatgctatttgtttcatatttcacctatggccggctttcctaagggcttaaggaga
ctgctagaagatgagtctgttaaaaaagttggtgtgggaattgaaggggaccagtggaag
ttaatgagtgactatgagctgaaacttaaaggctttattgaactttcagaagtggctaac
caaaaactaaggtgcaaggaaaagtggagtcttaatggtttggtcaaacaccttttcaag
aaacagcttttaaaagatagctctatacgttgcagcaactgggatatttttcctctcagc
acagaccagaaattgtatgctgcctctgatgcttatgctgggctactcatttaccagaaa
ctggagtgcatggatgcccacgagaaggtttctttttgtgttagtagagtgggtgttgct
gactttgaaggtattaaaagacagcttactgatctgtcaaatggatttatggatctggtg
aaggatgttccaagcagttttgggcattctacaggggctctaagagctgtggctattctg
gaagacctttcagagaaattggaggaattaaggagtattgttaaagaggcctcaaaagga
gaggggaatgggctgctttgccatgactcagaagactgcagtgaagaagacaagtatcaa
agtattaatttagcatctaaggaattgctggctgagaataaaatagactataaaaatgct
gagagcaaaaacaacaaagatgttgactgctgccaaaatgagaacatgaaacaagacttt
ttgggcataagtgaagaagaactttacatgatggaaagaaaagatgacgaaaaacaaatc
aaacctggtcaaaaatcaaatgagcatttatatgatactaatgaagaaaaaaacatgtca
tatataattgaaagtgatgaagaatttgaatctgaaattatcaagtccctagaagatttg
gacaatagcatagaagaagctattggaacaagtgtccatcagacaggcttaatccctgct
aaaagtgtggatactgttgcagatgaagaagaggatgaaggcatagaggaagaagatgat
gatgatgactgggatccatccataccagaacctaatgcagaacaggtttcttgcttgaaa
acatattttggccattcaagttttaaaccagttcagtggaaagtcattcattctgtttta
agagaaagaagagacaacctagttgttatggctacaggctatgggaagagtttgtgttac
cagtttgcaccagtttatacatctggcattggaattgtgatctgtccacttatttcactc
atggaggaccaggtgttacagcttgagatgtcaaatattccatcttgttttcttggatct
gcacaatcaaaaaatgttttacaagatgtgaaagctggcaggatgagagtaatttacatg
actcctgagttttgttctggagggatttccttacttcaggatcttgacaatagatatggt
atcactctaattgctattgatgaagcacattgcatttctgagtggggccatgatttcaga
agtgcctacagaagtttgggatcactgaagagaatgctaccaactgtgccaattgtggcc
ttgacagcaacagcaagcccctcaattcgtgaagacatctcaaaatctctcagtctccat
aatcctcagatcacatgcactagttttgatcgtccaaacctctacttagatgttgcaaag
aaaacaacaaacatttctacagaccttcaacagtttcttattaaaaagcaaggctctggc
tgggagtttgaaggagccacaattgtttactgtccaactagaaagacatcagaacaggtc
acagcagagctaacaaaacttggcattgcttgtggaacataccacgctggcatgggaatc
aaacaaagacgagacgtgcatcatcgcttcatgagagatgaaatacagtgtgttgtggcc
actgttgcatttgggatgggtatcaacaagccagacattcgcaaagttatccactatggt
gctcccaaagaaatggagtcatactatcaggaaattggaagagctggacgagatgggctt
cctagctgttgtcatgctctgtggacacaagcagacataaatttcaatagacacatgttg
ggtgagattccaaacaatagttttcgagagtacaaattgaagatgttgacaaagatggaa
aagtatctgaactcaagcaattgtagacgcaaaatcatcttgtctcattttgaagataaa
caactccgtaaggcctcctctggcatcatggggacagaaaaatgctgtgataactgtaag
acaagattgagatttaatatttcaataaatgacacagaagacaacctacaagagtttggt
caacaggcttacaaatttatttcagcagtagacattttaggacagaaatttggaactggt
gtcccagtgctctttcttcgtggttcaacttctcagcgactcccagatagattccgccat
catcctctttttagctgtgggaaagaccagactgaggccttctggaaggtgttggcacgc
cagcttatttctgaaggttatctacaggagtcttcaggccatacaaaattttctaccatt
tgtggtcttacttcaaagggtacaaactggttaatgaaggccagcaaccagcagcatcca
agcctcctcctgccatccaatgacgaattatgccttcgaagaacaacagtatcaaatagt
ataagccgtgttccaagccattcttccatgataccacatgcttcaccaaatacaagatcc
agtatacctaaagcaggcccagagaaaatctcattgaaggaaaagttttcgtatcaggaa
gctggaaagttgtccacagctgtagatgtttccaagagcagcagcttgaaacttcagaca
ccatgtaaacctttgcaagcggctgaaccagatgtttcacccaaagagatggaacttcag
acagctctatatggcagattggtagtagctagacaaaagattgctagcgagagagatata
ccgcctgctgtcctagctaccaacaaagtattagtagacatggcaaaattgaggccaacc
acaatcgaaaacatgaagaaactagacggagtgtcagaagccaagtcagcaatgcttgcc
cccctagtggaagttgttaaagagttctgcattgctaatagtttgaagatggatatattc
tcaagatctggatcccaatctgagttgacatcttcaactcaaagggagcaagacagcact
actttgccagagtcacagcgtatgtcctattcattgtttcaggagcagaatttgtctttg
aaaaaagttgcagatgctcgctgtttaagcatggcagcagtcggtatgcatttgtggcaa
gccttgaaagctggttatagtgtcgatgttcagagagctggcctgactcctggaattagg
aagctaattatagataatattaaaaatcctcccattaattcagacctttcaagttttaaa
gctattcgtgaatccattcctgctaacattgacagctacctcattagaatggcgattgct
ctgcttgagaaggaggagagcaatggggcccaaggacaacttgacttgccaacacagaaa
acactagttaagctagaagagcagcccaaaaatatttcagttgagaatataaagcacaaa
gcaactatgaacaattcattgtggattgaaaaaaagcccacacagcccacaactgcagaa
ctagaagaaacaaaagcaaaaccgttggcccccatcatgctggcatcatggaatgaaccc
agtctggatgctgacacagaggaattattttctgaatcacagagttacactacaacccca
aaaagaaaacttcctcaatggttcggtcctgcaaaaggaaatgcgggaacaaatgctgtc
aaaaaagcaaaaactgggaagaaaaaaggcatttttgattaa
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