Xenopus tropicalis (tropical clawed frog): 734080
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Entry
734080 CDS
T01011
Symbol
wars1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
734080 (wars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
734080 (wars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
734080 (wars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
734080 (wars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
734080 (wars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
734080 (wars1)
Prokaryotic type
734080 (wars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1b
DUF4287
Motif
Other DBs
NCBI-GeneID:
734080
NCBI-ProteinID:
NP_001039220
Xenbase:
XB-GENE-954237
UniProt:
Q28BU4
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All DBs
Position
8:complement(96622258..96637232)
Genome browser
AA seq
475 aa
AA seq
DB search
MSNCGTCTSGSLKPMDLYNSLTAQGDKVRALKSEKAPKEEIDVAVKLLLALKVDYKNVTG
QDYKPGVPPADNLPNNSNQPSTTDDDDDFVDPWTVQTGSAKGVDYDKLIVRFGSSKIDQE
LIDRIERVTGQKPHHFLRRGIFFSHRDMHQVLDAYEKKQPFYLYTGRGPSSEAMHMGHLI
PFIFTKWLQEVFNVPLVIQLTDDEKYLWKDLTIEKAYQYAVENAKDIIALGFDVNKTFIF
SDLEYMGKSLGFYQNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSFPE
IFKGRKDIQCLIPCAIDQDPYFRMTRDVAPRISYPKPALMHSTFFPALQGAQTKMSASDP
NSSIFLTDTPKQIKTKINKHAFSGGKDTVEEHRQFGGNWEVDVSYMYLTFFLEDDERLEQ
IKQDYSSGALLTGELKKLLIETLQPMIAAHQERRKHVTEETVKQFMMPRKLAFEF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctaactgtggcacgtgtacatctgggtccctcaaacctatggacttatataacagt
ttaacagcccaaggagacaaagttcgagcactcaaatctgaaaaggctcccaaggaagag
attgatgtggctgtgaagcttttattggccctgaaagtcgattataagaatgtgactggc
caggattacaaaccaggcgttcctccagcagataacctacctaacaacagcaatcaaccg
tctacaacagatgacgatgatgattttgttgatccatggacagtgcaaacaggaagcgca
aaaggtgtagattatgacaagcttattgtacggtttgggagcagtaagattgatcaagaa
ctcatcgatcgaatagaacgagtcactggacaaaagccacatcactttttacgcagagga
atatttttttcacacagagatatgcaccaggttcttgatgcatatgagaagaagcagcca
ttttacctgtacacaggaagaggcccttcctctgaagcaatgcatatgggtcacctcatt
ccgttcatctttacaaagtggctgcaggaagtattcaatgttcctttggttatacagtta
accgatgatgagaaatacctgtggaaagatcttacaatagaaaaggcttaccagtatgca
gtagaaaatgccaaggatattatagcattaggctttgatgtcaataaaacattcatcttt
tctgatcttgaatacatggggaagagtttagggttctaccaaaatgtggtaaaggtccaa
aaacatgtaaccttcaatcaagtgaaaggaatatttggctttacagacagtgactgcatt
gggaagatcagctttccagccatacaagctgctccatctttcagtagttcctttccagaa
attttcaagggcagaaaggacattcagtgcctcatcccttgtgctatcgaccaggatcca
tatttccgcatgacaagagatgtcgcccctaggattagttatcctaaacccgcactaatg
cactcgacatttttcccagcacttcagggagcacagactaagatgagcgccagtgacccc
aactcttctatcttccttacagacacgccaaagcaaatcaaaacaaagatcaacaagcat
gctttctctggtggaaaggataccgttgaagaacatcgccaatttggaggcaactgggaa
gttgatgtctcttatatgtacttgacattcttccttgaagatgatgagaggcttgaacaa
ataaaacaggattattcaagcggtgccctgctaactggagaacttaagaaactcctgatt
gaaaccctgcagccaatgatagcagcacaccaggagagaaggaaacacgttacagaagag
acagtgaaacagtttatgatgccacgaaagttggcatttgagttttag
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