KEGG   Xenopus tropicalis (tropical clawed frog): 779481
Entry
779481            CDS       T01011                                 
Symbol
parp4.1
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410  Base excision repair
xtr04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    779481 (parp4.1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    779481 (parp4.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    779481 (parp4.1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     779481 (parp4.1)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT PARP VWA_3 VWA VWA_2 VIT_2 BRCT BRCT_2 WGR-like_PARP4 PARP_reg VWA_CoxE PTCB-BRCT
Other DBs
NCBI-GeneID: 779481
NCBI-ProteinID: XP_031752091
Xenbase: XB-GENE-990903
UniProt: A0A8J1J615
LinkDB
Position
2:158299809..158415950
AA seq 1484 aa
MTNIAVKVTMGVFEDCVFFLKLNNLSIKEKGTLQSSITSNGGVISFVLNDKCTHVLVDPI
GSLSDSQLKTVEKHQILIVGADYVRECLEKQSLIKDYQYPSDAPPSDKQAQRLQEHRNTV
HPINTNELTDRFDREGSTDDENNISDSPDTEVVKYCFLQKGPQVAVLELLYFQESSSFPF
KISTIICQSKGPESDCCFQFADNAELACQKYKKSIEDLRNDGYDTAKSIPADIVPFLPGT
LQKVLLEDSIIQPKLSVDVGYFVETVWTEALTHLDQILSCPVNSISLSDVSKAEGVLLWV
RKALDTGVEPSDIRKAMAEFYQLIPHKEPLQVNIDVTLVSSKQDLCQRIQDIVNVCEINS
GELNPSSFAKYRALQCRIEHIDPESEEFLQVSQQVLEKQRSDEFINIIKIFRVSKSSEAT
EFERNLGNVKPLLHASTPHSFVGILYRGLILPKSTEDDLLRTDTGNLGSGIYFSDSISTS
IKYSEPAVTNGARLIVVCDVALGNCKDVYKRDFSLTAAPSGFHSVHGVRQIPGAKSDFEE
DEFVVYKKDQVTMRYVVQFCTDKDTVNMEPNKLTLQLENIEEDDDGENLQSYDVGEQTLS
DDVGKLVESDDETVRGVELPMKQEIQVKRGLQSIDGQQIPVDNVHVKGRIIDIAAEVTLF
QTYVSHSTEPIEAKYVFPLDRRDATVCGFEAFINGKHIIGEVKEKEQAHEEYRAAISEGH
GAYLMEEEAADVFTMSLGTLPPEATVIIKITYITVLSQLYGCRPLEFRIPFEVASWQVEN
PLKEKPEDEKEEDKKEKEKTEEDDEESSEDSEDSEDDYEEIFVPDGCFSLEMSIEMPSKI
ESLKCEAHRIKQKQTDCKAVITTFEDSDMHYDGFYLEITLEDLSFPRLWVEKHPEQDSEA
CMLVYRSSLEDTFDDWNVTICLDCSNSMESYFETAKQLALEAISDFLHADHKLNVVLFGT
NYKEFYPYTTQNWRNDKAKIRRFIKLAKPNMGGTELWKPLQALSLLPPSSGMHKILLISD
GHIQNESLVFKILNKNAGKMSIYSCAVGTTANKHLMRSLSQQTRGACVYSEDPLVSTEKI
GFQTQGIWSPSCWDMSVKWQQASLNCPEPIQAPTLIPPLFPYKHLLVCGFVSDCTQVTLK
ASFTDHELDTAVSATELQKSTGTMLHKMAANAIIRDYEDEILHLIKQKHEMKKHQLKPFI
IGLSKKYSLVSQCTRFVAEEKQEEQEKQENWVQNVQEMISAIDVDILPHMDWEIKKQKTP
WHKTSRYKRIMQGRRNSQSNEESSEENSSDHSSDGEEGSDPVPPNSATEKSDAAPPTQIS
SLSHKEKVTKCPSFSSLSALQCEEGYWQLNEALGSLINIDVNYLCNEFLVKNGIQSLGSK
GREEVPKLIATLLVLQVIRTNNLQGIKCKSLVSLDEPSGTSQFHQATERAMEWVRKRDSQ
YPGICNRLGLGKDWESATRKLLSIDPVDPSSDLYPAVSRDRSNS
NT seq 4455 nt   +upstreamnt  +downstreamnt
atgacgaacattgccgttaaggtgacaatgggcgtctttgaagattgtgtgttcttcctt
aaattgaacaacttatccattaaagagaaggggacactgcagagctcaataacttcaaat
ggaggagttatatcctttgtactgaatgacaagtgcacccatgtgttggtggatcccatt
ggctctctgagtgattcccaactaaaaaccgtcgagaagcatcagattctgattgtgggc
gctgattatgtgcgggaatgtttagagaagcagagtctgattaaagattatcaatatcca
agtgatgccccaccaagtgacaaacaagcacaaaggttgcaagaacacaggaatactgtg
cacccaatcaacacaaatgaattaacggacaggtttgacagggaaggtagcaccgacgac
gaaaataatataagtgactctccagatactgaagtggtgaaatactgtttccttcaaaaa
ggaccgcaagtggctgttttggagctgttgtactttcaggaatcgtcatcttttccattc
aaaatatctacaataatctgccaatccaaagggcctgagagtgactgctgctttcagttt
gcagacaatgcagagttggcttgtcagaagtataagaaaagcattgaagatttaagaaat
gatggctatgatacagcaaaaagcatcccagcagatattgtcccattcctaccagggaca
ctgcagaaggtgttacttgaagacagcataattcaaccaaaactctcagtggatgtcggg
tattttgtggaaacggtttggactgaggctcttactcatttggaccagatcctctcctgt
ccagtaaacagcatcagtctcagtgatgtaagcaaagcagagggggttttactctgggtt
aggaaagctctggacacaggagttgaaccttctgacataaggaaagcaatggctgagttt
tatcagctcattccccataaggaacctctgcaggtcaatattgatgtgactcttgtgtca
tcaaagcaggatctatgtcagcgtattcaagacattgttaatgtgtgtgagataaactct
ggagagctgaacccaagtagctttgctaaataccgtgccctgcagtgcagaatagagcac
atcgaccccgagtctgaggagttccttcaggtgtcccagcaagttctggagaagcagcgc
agtgatgaattcattaatataataaaaatattccgcgtttcaaaatcaagtgaggccaca
gaatttgaaaggaaccttgggaatgtcaagcccctccttcatgcatctacacctcacagt
tttgttgggatcctttaccgtgggctgattttgccaaaatccacagaagatgatttgctg
agaactgatacaggaaatcttgggagcggaatttatttcagtgattctataagtacaagt
attaaatattcagaacccgctgtaaccaatggggcgcgtctgattgtggtttgtgatgtg
gccctgggtaactgcaaggatgtctacaagagggatttctccttaaccgcagctccaagt
ggctttcacagtgttcatggagtcaggcaaattcctggggcaaaatctgattttgaggag
gatgaatttgtggtttataagaaagatcaagtgacaatgagatacgtggttcagttctgc
actgataaagacacagtgaacatggaacccaataaacttactcttcagctggaaaacata
gaggaagatgatgatggagaaaacctacaatcttatgatgttggagaacaaacactatca
gatgatgttggcaaactagtagaatcagatgatgaaacagtgcgtggagtggagttgcca
atgaaacaagagatacaagtaaaacgtggtcttcagagcattgatggccagcagattcct
gtggataatgttcatgtaaaaggcagaataatagatatcgctgcagaggtgacgcttttc
cagacatatgtaagtcattccacggagcccatagaggctaaatatgtttttccactggac
agacgtgacgccactgtgtgtggatttgaagcatttataaatggaaaacacattatagga
gaggttaaagagaaggagcaagcgcatgaggagtacagggcggctatcagcgagggacat
ggggcttaccttatggaagaggaggctgctgatgtcttcacaatgagtcttggaacactg
cctccagaagccaccgtcatcatcaaaatcacctacataacagtgctgagtcaactgtat
ggttgtcgtcctttagaattccgcattccttttgaagtagcctcttggcaagtggaaaat
cctttgaaagaaaaaccagaggatgaaaaagaagaggataaaaaagaaaaggaaaaaaca
gaagaggatgatgaagaatcgtctgaagattcagaagattcagaagatgattatgaggaa
atctttgtgccagatggttgtttctctctggagatgtctattgagatgccttccaaaatt
gaatcccttaaatgtgaagcacacaggattaaacagaaacaaactgattgcaaagctgtg
atcacaacatttgaagacagtgatatgcactatgacggcttttatctggaaatcacattg
gaagacctttcctttcctaggctgtgggttgaaaaacacccagaacaagacagtgaggca
tgcatgctggtatatcgctccagtcttgaagatacatttgatgattggaacgtaaccatc
tgccttgattgctccaattctatggaatcctattttgaaactgcaaagcagcttgcacta
gaagcaattagtgattttttgcatgccgatcacaagctaaatgtagttctttttggtaca
aattataaagaattttatccttatacaactcagaactggcggaatgacaaagctaaaata
cgaaggtttatcaaactggcaaaaccaaacatggggggcacagagctgtggaagcctttg
caggccttgagtttgttgcctccatcctcgggaatgcataaaattcttcttatatccgat
gggcacatacagaatgagagtcttgtctttaaaatcctgaacaagaatgctgggaaaatg
agtatatacagctgcgctgttggtacaacagcaaataaacatctgatgaggtctttgtct
caacaaactcgtggtgcctgtgtgtattctgaagaccctttagtctctacagaaaagatt
ggatttcagactcaaggaatatggtctccttcgtgctgggatatgtctgttaaatggcag
caagcaagcctgaactgcccagaaccaatacaagctccaacactcatacccccattgttc
ccatacaagcatctactagtttgtgggtttgtctctgattgcactcaggtcacacttaaa
gcttcatttacagatcatgagcttgacactgcggtatcagctaccgaattgcaaaaatct
acaggaacgatgcttcacaaaatggcagccaatgccattatcagggattatgaggatgaa
atcctgcacctaatcaaacagaagcatgagatgaaaaaacaccaattaaagccctttatt
attgggctcagcaagaagtactcacttgtgagtcaatgtacacgctttgttgctgaagaa
aaacaggaggagcaggaaaagcaagagaactgggtgcagaatgtgcaggaaatgatatct
gcaatagatgttgatattctgccccacatggactgggaaattaaaaaacagaaaactcct
tggcacaaaactagccgctataaaagaataatgcagggacgtcgtaactctcaatccaat
gaggaaagctctgaagaaaacagttctgaccacagttctgatggtgaagaaggatctgac
ccagtgcctcctaattccgcgactgaaaagtctgatgcagcacctcctacacagatttct
tcattgtcccataaagaaaaagtgacaaaatgcccatctttctcttcactgtctgctcta
cagtgtgaggagggatactggcagctgaatgaagctctcggatcattgataaacattgat
gtcaattacttgtgcaatgagtttttagttaaaaatggtatccagtcccttgggagcaaa
ggaagggaagaggttccaaaactcattgccacactcttggtgctgcaagtaatccgcact
aataacttgcaggggataaaatgtaagagtttggtgtcactggatgagccctccggcacc
agccagttccaccaggcaactgagagagccatggaatgggtgagaaagagagacagtcag
tatcctggcatctgcaatcgactcggcttgggcaaagactgggaatctgccacccggaag
ttattatccattgatcccgtggatccttcctctgatctttatcctgctgtgagcagagac
agatccaacagttaa

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