KEGG   Xenopus tropicalis (tropical clawed frog): 779488
Entry
779488            CDS       T01011                                 
Symbol
per1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    779488 (per1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    779488 (per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 779488
NCBI-ProteinID: NP_001184158
Xenbase: XB-GENE-495464
UniProt: A0A803J8H3 A0A8J0QEC1 Q0P4U2
LinkDB
Position
3:144427388..144461415
AA seq 1236 aa
MNGGCEPPPPLGERVRRTRGPREMEGTQQDETDTNSHGSSGNESNGNESRQSRSSHSSTS
GNGKDSAMLEATESSKSTNSHSPSPPSSSIAYSLLSASSEQDNPSTSGCSSDQSAREKSQ
KELMKALKELKIRLPSEKRLKGKSGTLATLQYALSCVKQVRANQEYYQQWTIDDSQPCCL
DMSSYTIEEVESVTSEYTLKNPDTFSVAVSFISGRIVYISDQASLILHCKKEVFKGATFA
EFLAPQDVSVFYGSTAPYHLPSWSSCTSGDTASMDYTQEKSVFCRISGGRERDMNIRYHP
FRLTPYLMKVRDTDNAEGQPCCLLIAEKIHSGYEAPRIPPDKRIFTTRHTPSCVFQEVDE
RAVPLLGYLPQDLIGMPVLLFIHPEDRPLMLAIHKKVLQQAGQPFDHSPIRLCARSGEYV
TIDTSWSSFVNPWSRKVSFILGRHKVRTSPLSEDVFTAPKGAELKPLDFDTQELSEQIHR
ILLQPVHSTAGGNGSGGSNISQEPFHCNASSSDSNAMVTEEGADRKPMTFQEFCQNVNMV
KNQGQQVFLGSRSMRTPQRGPFQALPPPRPVAPQGTDSTPSEPLPPRIPCLGDELGRKES
TNYSYQQINCLDSIVRYLESCNLPSTVKRKCGSSSYTSSTSEEEKQRTGEMDKEDTTGGR
VHQQELPPPPTPTAVGAAPLAPLPPLPPSKAESVVSITSQGSFSSTIVHVGDKKPPDSEM
VLMEDSPCPAAPAPPPRPLGLTKEVLSAHTQREEQAFLTRVHNLSQLRVFDPPPAGAWEE
HNQRPHRGAKPPRAPQHHHAASSNPLSPSKGESRAGGGRGKSGKSKAKRPKQGKSPSSSS
MQTHNLLDANLLPPPPPVIPGYPLPMYPPRAPDPTPAVPRYPLVTPIVALVLPNYLFQPP
PVAPPFYPGVNGFPPFAPSTETPPAAPEAPPPAPPPPAPAAPCAPPSRSSSPPHRLFPSR
CSSPLQLDLLQMEELPQPGAGGGGEWELEEEVKGGKGGAAPGTSVGGGGTNTGTGNAEEN
SPAENCMGDPHESSSHNDALSSSSDLLDLLLQEDSCSGTGSAASGSMGSNGGSTSACGTR
SSESSNTSKYFGSIDSSEGDLRGKKSERDEAERKVIRYVMQDPLWLLMANADHDVMMSYQ
LPPRDMERVLQEDREKLRQLQRHQPKFSEEQKRELGEVHSWVRRGRLPHVINITSCTGCS
PDGPPYDEDLDLSIMMEEGGDCAAVGEEGGGKATSG
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgaatgggggctgtgagcctcccccccctttaggggagagggttagacgaacgaggggt
ccccgggaaatggaagggacccagcaagatgaaacagacaccaacagccacggctccagc
ggcaacgagtccaacggcaacgagtctcggcaaagtcgcagttctcacagcagcaccagc
ggcaacgggaaggactcggccatgctggaagccaccgagagcagcaagagtacaaactct
cacagtccatctccgccgagcagctctattgcctacagtctgctgagtgccagctccgag
caggacaatccttccaccagtggctgcagtagtgaccagtctgcaagggagaaaagccag
aaagagttgatgaaggccctgaaagagcttaagattcgcctcccatcggagaagcggctg
aaaggcaaatctggcaccctggcaaccctgcagtatgccctttcctgcgtcaaacaagta
cgagctaaccaggagtattaccagcagtggactatcgatgactcccagccatgttgcctg
gacatgtccagttacaccatcgaggaggtggagagcgtgacctcggagtataccctaaaa
aatcccgatacattctctgtggcagtctcattcatcagtggtcgaattgtgtacatctca
gaccaggcttctctcatcctgcattgcaaaaaggaggtgttcaagggggccacattcgct
gagtttcttgctccacaggatgtcagtgtcttctatggatctacagccccatatcatctc
ccttcctggagcagctgcacctctggggatactgcatcaatggactacacgcaagagaaa
tctgtcttctgtcggatcagtgggggccgagagcgggatatgaacatccgctatcaccct
ttccgcctcacaccttacctgatgaaggtgcgagacacagacaatgccgagggccagccc
tgctgtcttctgattgcagagaagatccattccggatatgaggccccaaggatccctccg
gataaacggatcttcactaccaggcataccccgagctgtgtgttccaggaggtggacgag
agagccgttcccctcctcgggtacctgccccaggatctcatcggaatgccggttctgtta
tttattcatccagaggatcgacctctcatgctggcaattcacaagaaagttcttcagcag
gcagggcagccattcgaccactctcccatacgtctgtgtgcccggtctggcgaatacgtg
accatcgataccagctggagcagctttgtaaatccctggagcaggaaggtgtcgtttata
ctggggaggcacaaagtccgcacgagtcctctcagtgaagatgtatttactgccccaaag
ggggcagagcttaagcctctggactttgatactcaggagctgtcagagcagatccatcgg
atacttttacagccggtgcacagtacagccgggggcaatggcagcgggggcagtaacatt
tcccaggagccatttcactgcaatgcctcttctagtgacagcaatgccatggtgaccgag
gaaggcgcagaccgcaaacctatgacattccaagagttctgtcagaacgtgaatatggtg
aagaaccaggggcagcaggtgtttctgggatcccgcagtatgcgcacaccgcagaggggg
ccgttccaagctctaccgccccctaggcctgttgccccacaaggcactgacagtacccca
tcagagcctctgcctcccagaatcccctgccttggagatgagcttgggcggaaagagagc
accaactattcctatcaacagatcaactgtctggacagcatagtccggtacctagagagc
tgcaatctccccagcacagtgaagcgtaagtgcggctcttcttcttacacttcgtccacc
tcggaggaggagaagcagaggacgggggagatggataaggaagacactactgggggcaga
gttcatcagcaggaattacctcccccacctacccccactgctgttggtgctgccccactt
gcccctttgcccccgctaccccccagtaaggccgagagtgtggtgtccatcaccagccag
ggcagcttcagcagcaccatcgtccatgttggggacaagaagccccctgactcagagatg
gtcctaatggaggattccccgtgccctgcagctccggccccccctcctcgcccgttgggt
ctgaccaaggaggttctctcagcacacactcagagggaggagcaagccttcctcacacga
gtacacaacctcagccagctccgagtgtttgatccgccccccgccggggcctgggaggag
cacaaccagcgtcctcaccgaggtgcaaagcctccgcgtgccccccagcaccaccatgcc
gcctccagcaatcctctgtcgccatccaagggagaatcacgcgcagggggtggccggggc
aagagtggcaaatcaaaagccaagcgccctaagcaaggcaaatccccctcctccagctcc
atgcaaacgcacaacctcctagatgccaaccttctacctccccctcctcccgttattcct
ggataccccctgcccatgtaccccccacgggctcctgaccccaccccagctgtccccaga
tacccactcgtcactcctattgtagctttagtgctgcccaactacctcttccagcctcct
ccagttgcacctcctttctaccctggggttaatgggtttcctccttttgccccttctact
gagaccccgcctgctgcacctgaagcccctcctccggctcctcctcctccagctcctgct
gcaccttgtgctccaccttcccgctcctcttcccctccccatcgcctcttcccgtctcgt
tgcagctcccccctgcagcttgacctgctgcagatggaggaattgcctcaacccggggca
ggaggagggggggagtgggagctggaagaagaagttaagggaggtaaaggaggagcagca
cccgggacatctgtaggcggaggcggaaccaacacaggaacaggaaatgcagaagagaac
agcccggcggagaactgcatgggcgacccccacgagtcctcctcccacaacgacgcactc
tccagctccagcgacctattagatctgctcctgcaggaggattcgtgctccggaacaggg
tccgctgcctccggctccatgggatccaacggggggagcacctccgcctgtggcacaaga
agcagcgagagcagcaacaccagcaagtacttcgggagcatcgactcctcggagggggac
ttgcgaggaaagaagtcggagagggacgaggcggagaggaaagtgatccgatacgtcatg
caggaccccctctggctcctaatggccaacgccgaccacgacgtgatgatgtcataccag
ctcccacccagggatatggagcgcgtcctgcaggaagatagagagaagctcaggcagctc
cagaggcaccaaccgaaattcagcgaggagcagaagagggagttgggggaggtgcacagc
tgggtgaggagaggccgcctaccccatgtcatcaacatcacctcttgcacgggctgctcc
cccgacggccccccatacgatgaggatctagacttgtccataatgatggaagagggaggg
gactgtgcggcggtaggagaggagggtggcggaaaggcgacaagtggatga

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