Xenopus tropicalis (tropical clawed frog): 779621
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Entry
779621 CDS
T01011
Symbol
rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X4
KO
K08526
retinoid X receptor gamma
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03320
PPAR signaling pathway
xtr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
779621 (rxrg)
03320 PPAR signaling pathway
779621 (rxrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
779621 (rxrg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
779621 (rxrg)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
779621 (rxrg)
Nuclear receptors [BR:
xtr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
779621 (rxrg)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
CRT10
Motif
Other DBs
NCBI-GeneID:
779621
NCBI-ProteinID:
XP_002933799
Xenbase:
XB-GENE-478493
UniProt:
A0A6I8QSZ2
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Position
4:118932825..119001470
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AA seq
468 aa
AA seq
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MDTQYHPIMKFPAGFSNAPLHAHSTSVSSSSNLAAMNSLDVHTGYMGNSMNGPRSMTTNM
NSLCSPGNNIGPPYRVIASSMGPHSLPSPTILNFPGHESPPFNLMNNISCSEDIKPPPGL
SNLGSPCMNNYSCNSPGALTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLVYTC
RDTKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRSREKSDTEAESTSSTSEEMP
VERILEAELAVEPKIEAFGDAGLPNSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPL
EDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHNAGVGSIFDRVLTELV
SKMKDMEMDKSELGCLRAIVLFNPDAKGLSNAAEVEALREKVYATLESYTKQKYPEQPGR
FAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPHQIS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggatacacagtaccatccaatcatgaagtttcctgcaggattcagcaatgctccgctt
catgctcattcaacatcagtcagctcctcgtctaatctggcagcgatgaattctctagat
gtgcacacaggatacatgggaaattccatgaatggaccaaggtctatgacaacaaatatg
aattctctctgctctccgggcaataatataggccctccatacagagtgattgcatcctcc
atgggaccgcactccctgccttctccaacaatcctcaatttccctggccatgagagtcca
ccgtttaacctcatgaacaatataagctgttcggaagacattaagcccccgccaggtctc
agcaaccttgggagtccgtgcatgaacaattattcgtgcaacagcccaggggcattaacc
aaacacatctgtgccatctgcggggacaggtcctcaggcaaacattatggagtgtacagt
tgtgaaggatgtaaaggtttttttaaacgcacaataagaaaagatttggtttacacatgc
cgagataccaaagactgtttgatcgacaagcgtcagcgcaatcgctgccagtattgccgc
tatcagaagtgtctggccatgggtatgaagcgggaagcagttcaagaagaaaggcaaaga
agccgagagaagagtgacaccgaggcggaatctactagtagtacaagtgaggaaatgcca
gtggagagaattctggaagcagagctggcagtggaaccgaagatcgaagcattcggagat
gctggtttgccaaattctacaaatgacccagtcaccaatatatgccacgccgcagacaag
cagctatttaccttggtggaatgggcaaaaagaattccacatttttcagatttgccttta
gaagaccaagtcattctgctgcgagcaggttggaatgaattactgattgcttccttttcg
caccgttcagtttctgtgcaggatggcattcttttggctaccggtttacatgtccacaga
agcagcgcacacaatgcaggagtaggctcaatctttgacagggttctaactgagctggtc
tctaaaatgaaagatatggaaatggataaatcagagctgggatgcctgagagctattgtt
ctgtttaatccagatgcaaagggactgtccaacgctgcagaggttgaggcactgcgtgaa
aaagtctatgccactcttgaatcctacaccaaacaaaagtacccagagcagccaggaagg
ttcgctaaattgctgttacgtcttccagctttgagatctattggacttaagtgcctggag
caccttttcttcttcaagctcattggcgacacacccattgatacattccttatggaaatg
ctagaaacacctcaccagatttcatga
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