Xenopus tropicalis (tropical clawed frog): 779626
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Entry
779626 CDS
T01011
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00600
Sphingolipid metabolism
xtr01100
Metabolic pathways
xtr04382
Cornified envelope formation
Module
xtr_M00094
Ceramide biosynthesis
xtr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
779626 (sptlc1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
779626 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
779626 (sptlc1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
779626 (sptlc1)
Amino acid related enzymes [BR:
xtr01007
]
Aminotransferase (transaminase)
Class II
779626 (sptlc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
779626
NCBI-ProteinID:
NP_001073042
Xenbase:
XB-GENE-1004880
UniProt:
Q0VGY2
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Position
1:complement(139032586..139071853)
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AA seq
472 aa
AA seq
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MATSQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLIFSKTYKLQERSDLTEKEKEELI
DEWRPEPLVPPVSKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNDRVKSAA
LASLRKYGVGTCGPRGFYGTFDVHLELEERLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIVFVDEAACFAIQKGLQASRSSIKYFKHNDMDDLERLLKEQELEDQKNPRKASVTRRF
IVAEGLYMNTGDICPLPKLVELKYKYKVRIFLEESLSFGVLGEHGRGVTEHFGINIDDID
LISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLASAAIEGLNIMEENSE
LFDTLRVKCKRIHKALQGICGLKVVGESFSPAFHLQLEKSTGCREKDMKLLQNIIDHCMN
RKIALTLARYLEKEEKFLPTPSIRVVVTVEQTDEELDTAASVIKQAASLILD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtcagcagtgggttttggtggaaatggtacaggcgttttacgaggcacct
gcataccatttgatactggaagggattctgatattatggattatcagactcatattttca
aagacatacaaactgcaggagcgctcagacctcacagaaaaggagaaagaagaattgatt
gatgagtggcgcccagagcctcttgttcctccagtctctaaagatcatccagctctcaac
tataacattgtttcagggcccccaagtcacaagattgttgtaaatggaaaagaatgcata
aattttgcatcatttaatttcctcggtcttctagataatgacagagttaagagtgcagct
cttgcttctctaagaaagtatggtgttggaacctgtggaccaaggggattttatggtact
tttgatgtgcatttagagctagaagaaagattggcaaaatttatgaagactgaagaggct
ataatttattcctatgggtttgcaactattgccagtgcaatcccagcatattctaaaaga
ggagatattgtatttgtcgatgaggctgcatgttttgctattcaaaaaggcttacaagca
tcacgaagcagtatcaagtactttaaacataatgatatggatgacttggagagattacta
aaggagcaggagctggaggatcagaagaatccccggaaagcttctgtgacaaggagattt
attgttgcagaaggattgtatatgaacactggtgatatttgtcctcttcctaaactggtt
gaactgaagtataagtacaaagtaaggatatttctggaagaaagcctctcttttggtgtt
ttaggggaacatgggcgaggagttacagaacactttggaataaatattgatgacattgac
ctcattagtgctaatatggagaatgcattggcttcaattggaggattttgctgtggccga
tcttttgtaatcgatcaccagcgactgtctggtcaaggttactgcttctctgcatctttg
cctcctctcctggcttctgcagctatcgaaggtcttaacatcatggaggaaaactcagag
ttatttgataccctaagggtcaagtgcaagcgaattcataaagctttgcagggaatttgt
ggtttaaaggtggtaggtgagagcttctctcctgcatttcacctgcaactagaaaagagc
acgggatgccgtgaaaaagatatgaaattgctccaaaatataatagatcattgtatgaat
aggaaaattgcattgactctggctcgttatttggaaaaagaagagaagtttcttcctact
ccgagcattagggtggtagtgacggtggagcaaacagatgaagagttggatacagctgca
tcggttattaaacaagctgcatcattgatcctggattaa
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