Xenopus tropicalis (tropical clawed frog): 779637
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Entry
779637 CDS
T01011
Symbol
stx1a
Name
(RefSeq) syntaxin-1A
KO
K04560
syntaxin 1A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
779637 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
779637 (stx1a)
Membrane trafficking [BR:
xtr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
779637 (stx1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Spectrin_Anc-1
PspA_IM30
Prominin
GNVR
Ferritin
DUF5856
Lzipper-MIP1
EcoEI_R_C
FlgN
ETRAMP
EAK4_helical
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
779637
NCBI-ProteinID:
NP_001072191
Xenbase:
XB-GENE-976753
UniProt:
Q0VFR6
A0A8J0PLF9
LinkDB
All DBs
Position
2:41461298..41552673
Genome browser
AA seq
288 aa
AA seq
DB search
MKDRTRELRAAKDSDEDDEVTVSLDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSA
ILASPNPDEKTKAELEELMSDIKKTANKVRSKLKGIEQSIEQEEAMNRSSADLRIRKTQH
STLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFSSG
IIMDSNITKQALNEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASTFGGIFG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcggaccagggagctacgtgctgcaaaggacagcgatgaggatgatgaggtt
actgtgagcttggatcgagatcgtttcatggatgaattttttgaacaggttgaagagatc
agagggttcattgacaagattgctgaaaatgtggaggaagttaaaagaaaacacagcgct
atcctcgcttcacccaaccctgatgagaaaacaaaggccgagctggaagagctgatgtcg
gacatcaaaaagacagccaacaaggtccgttccaagctgaagggtattgagcagagcatt
gaacaggaagaagcaatgaaccgctcctcagctgacttgcgtatacgtaagacacagcat
tcaacactgtcacgaaaatttgttgaagtgatgtccgaatacaacgccacacaatccgac
taccgtgagcgatgcaaaggccgcatccagcgacagctggaaatcactggcaggaccaca
accagtgaagagctggaggacatgctggagagtggaaatccagctattttctcctcaggg
ataattatggattccaatattaccaagcaggctctaaatgaaatcgagacgcggcacagt
gaaatcatcaagctagagaacagcatccgcgagctgcatgatatgttcatggacatggct
atgcttgtagagagtcagggtgaaatgatcgaccgcatagagtataatgtggaacactcc
gtggattatgtggaaagagcagtgtccgacaccaagaaggcagtcaagtaccagagtaaa
gccagaaggaagaaaatcatgatcattatctgctgtgtggtgctgggtattgtcattgct
tcaacatttggagggatttttggataa
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