Xenopus tropicalis (tropical clawed frog): 779669
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Entry
779669 CDS
T01011
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
779669 (atl1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
779669 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
779669 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
779669
NCBI-ProteinID:
NP_001072222
Xenbase:
XB-GENE-945669
UniProt:
Q0VFK0
LinkDB
All DBs
Position
8:93021268..93065573
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AA seq
531 aa
AA seq
DB search
MARNRKERNSWGGFTDRNYDWSSEEEEYEKKAHPVQVLVVKDDHSFELDEAALNRILLSE
AVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYKTDTVDWLGDYNEPLSGFSWRGGSERET
TGIQIWSEIFLVENPDGNKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQ
NVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFPYGSDGGNKFLEKRL
KVSENQHEELQNVRKHIHSCFTNISCFLMPHPGLTVATNPNFDGKLKEIDEEFIKNLKVF
IPWLLSPENLDVKEISGNRITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAV
ATAKDLYNKNMEEVCGGDRPFLAPTDLQQRHQHLKEEAVKLFRGVKKMGGEEFSRRYLQQ
LENEIDELYVQYIKHNDSKNIFHAARTPATLFVVIFITYVLAAVTGFIGLDIIASLCNMI
MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQVSSIVLLQLYISAI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcccggaaccgcaaggagaggaacagctggggtggatttactgacagaaattatgac
tggagctcagaggaggaggaatatgagaagaaggctcacccagttcaggtcctggtggtt
aaagatgaccattcctttgagttggatgaggccgcattgaaccgcattctgctgtcagaa
gcagtcagggacaaggaggtggttgctgtgtcagtagctggagcatttagaaaaggaaaa
tcattcctgatggactttatgctgagatatatgtacaaaacggatacagttgattggctt
ggtgattataatgagccactgtctggtttctcctggagaggaggttctgaacgggaaacc
acagggattcagatatggagtgaaatctttctggtggaaaatcctgatggtaacaaggtc
gcagtgttactaatggatacccaaggaacctttgatagccagtctacacttagagattct
gctacagtatttgccctcagtactatgattagctccatacaggtgtacaacttgtctcag
aatgttcaggaagatgatttacaacacctacagctctttacagagtatggaaggctggca
atggaggagacatttctgaaacccttccagtcccttatttttctcgtacgtgactggagt
tttccatatgaattcccttatggttctgacggaggcaacaagtttttggaaaagaggcta
aaggtctctgaaaaccagcatgaagagctgcagaatgtaagaaagcacatccactcctgt
ttcacaaacatatcttgctttctcatgccccatccaggcctcactgtagcaacaaaccca
aactttgacggaaaactaaaagaaatagatgaagaattcataaagaatttgaaggtattt
attccatggcttttgagccctgagaacttggatgttaaagaaatcagtggaaacagaatc
acttgccgaggtctggtggaatattttaaggcttatataaagatttatcaaggtgaagaa
ttgccacatcccaaatccatgttgcaggccacagctgaagccaacaatctcgctgctgtg
gcgacagcaaaggatttgtacaataagaatatggaagaggtatgtggtggtgacagacca
ttcttggcacctactgatctgcaacagcgacaccagcatctgaaagaagaagcagtgaag
ctgtttcgtggggtaaaaaaaatgggaggagaggaattcagccgccgttacctgcagcaa
ctggaaaatgaaatagatgagctttatgtgcagtatatcaagcataatgacagcaagaat
atattccatgccgcgcgcacccctgcaactctctttgtggtcatattcattacttacgtg
ctggctgctgttactggttttattggtttggacattatagccagcctgtgcaacatgatc
atgggactgactcttatcacactgtgcacctgggcatatatcagatattcaggggaatac
agagagttgggagcagtaatagatcaggtggctgcagctctgtgggaccaggtaagtagt
attgtgcttctacagctttacatatctgcaatataa
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