Xenopus tropicalis (tropical clawed frog): 779671
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Entry
779671 CDS
T01011
Symbol
rnf34
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
779671 (rnf34)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
779671 (rnf34)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
779671 (rnf34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
HeH
SAP
Prok-RING_4
zf-C3HC4_2
DUF7587
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
779671
NCBI-ProteinID:
NP_001072224
Xenbase:
XB-GENE-955597
UniProt:
A0A803KH93
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Position
1:complement(162369596..162389804)
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AA seq
362 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGAVRGQQPGFGGGAGPFRFTSNTDFSPYPSSSSSSIVC
KACGLAFSVFRKKHVCCDCKKDFCSVCSTPQENFRRCSTCHLLQETDFQRPQLMKLKVKD
LRQYLSLRNIPTDSCREKEDLVDLVLCHHGPCPTEEMDISMDSSARSRSSSFFTHSFFSS
PSAPSPSVSSSQGELSERSGSTATSQGTSEIISASDTEPQELQTAEQSRKRARVSLSDLS
TLEDIDGLTIRQLKEILARNFVNYSGCCEKWELVEKVSRLYRENEENRKSLQKSESKADP
EKECRSLTGSDDNLCRICMDAVIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVF
KS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggccagctccatgtgggcttcttgctgtggcttgctgaatgaagtcatg
ggtaccggagccgtgcgaggtcaacaaccaggtttcggaggaggagctgggccatttcga
tttacatcaaatacggatttttctccttatccttcctcttcctctagcagcattgtgtgt
aaagcatgtggactagcattctctgtctttaggaagaagcatgtgtgctgtgattgcaag
aaggatttctgctcagtgtgctctacacctcaggagaactttagacgctgcagtacctgc
catctgctacaggagacagactttcaaaggcctcagctaatgaagttaaaagtaaaggat
ctgcggcagtatctatcccttagaaacatccccactgacagttgcagagaaaaagaagat
ttggtagatctggtattgtgccatcatggcccttgtcccacagaagaaatggacattagt
atggacagctctgcaagatctcggtcctccagcttcttcacacattcatttttctcttca
ccttctgcgccttcaccatcagtgtcctcatctcagggagaactatctgaaagaagtggt
agcacagccacatcccagggtacatctgaaataatctcggcatctgatacagaaccgcaa
gaactacagacagcagaacagtcacgaaagagagcaagagtgtccctgtcagatctttca
acactggaggatattgatgggctcacaatcagacagctaaaggagatcctggcacggaac
tttgtcaactactcgggatgctgtgagaaatgggaactggtagaaaaagtcagtcgctta
tacagagaaaatgaagagaacagaaaatctttgcagaagtcagaaagcaaagcagaccca
gagaaagaatgccgctcattgacaggcagtgacgacaacctctgcagaatctgtatggat
gcagttatcgactgtgtgctcctagagtgtggccacatggtgacgtgcactaaatgtggg
aagagaatgagcgagtgccccatatgccgccagtatgtggtgcgcgctgtccacgtattt
aagtcttaa
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