Xenopus tropicalis (tropical clawed frog): 779673
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Entry
779673 CDS
T01011
Symbol
sycp3
Name
(RefSeq) synaptonemal complex protein 3
KO
K19528
synaptonemal complex protein 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
779673 (sycp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
779673 (sycp3)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
779673 (sycp3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
779673 (sycp3)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Sperm associated proteins
779673 (sycp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cor1
FtsK_4TM
Caps_syn_GfcC_N
Motif
Other DBs
NCBI-GeneID:
779673
NCBI-ProteinID:
NP_001072226
Xenbase:
XB-GENE-5764718
UniProt:
F6Y8Y9
LinkDB
All DBs
Position
4:complement(9506581..9518425)
Genome browser
AA seq
235 aa
AA seq
DB search
MAPRRRKAAAKSAKIVQEKKLTHSYKIQQKDLSGSEEDIKNDETPVIDKCRKKRPSSSLS
NQGADNDYMGDEVQNMLGRFGADISKALMAKRKRLETYTKASLKTSNQKIENVWKTQQDD
RQKLSSEYSQQFGDLCQRWEADAQKAEEQDEKLTNMIRQQQKLFHQARIVQNQRLKTIRQ
DNEQFLKNMSDLEKTHENAQNELKKEMALLQKKIMMDTQKQEMASVRKSLQSMLF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctagaagaagaaaggcagcggcgaaatctgctaagatagttcaagagaagaaa
ttaacacattcctataaaatacagcaaaaagatcttagtggatcggaggaagatatcaaa
aacgatgagaccccagtaatagacaaatgcagaaagaaaagaccttcatcatctttgtca
aaccaaggagcagataatgattacatgggggatgaagtgcagaatatgttgggaagattt
ggggctgatattagcaaggctctaatggcaaaaaggaagaggctggaaacatacacaaag
gcatctctgaaaaccagcaaccagaagattgagaatgtttggaaaactcagcaagatgac
aggcagaagctgagcagcgagtattctcagcagttcggggatttgtgtcaacgatgggag
gctgatgcacaaaaagcagaggagcaagatgaaaaattaacgaacatgattcgtcagcag
cagaaactgtttcaccaagcaagaatagttcagaaccagagactcaaaaccataaggcag
gacaacgagcagtttttaaagaatatgagcgaccttgaaaagactcatgaaaatgctcag
aatgaactcaagaaggaaatggctttgctgcaaaaaaagattatgatggacactcaaaag
caagagatggcaagtgtccgcaagtctcttcagtcaatgttgttctga
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