Xenopus tropicalis (tropical clawed frog): 779710
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Entry
779710 CDS
T01011
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
779710 (prdm4)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
779710 (prdm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
SET
zf-C2H2_jaz
zf-C2H2_16
DUF5810
Teflon_C
Zf-C2H2_ZNF451_C
zf-met
Motif
Other DBs
NCBI-GeneID:
779710
NCBI-ProteinID:
NP_001072257
Xenbase:
XB-GENE-958481
UniProt:
A0A8J0PL65
Q0VA56
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All DBs
Position
3:7529631..7540694
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AA seq
783 aa
AA seq
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MHYRMNELNLSTVGIDQLTSSSVANSLTVSGSHLGLSGSPPHNTLPAPGLPVAIPNLGPS
LSSLPSALSVMLPMGIGDRGVMCGLPERNYPLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPSPLNVDGNSGLSVSNAPQSLDPFQPGGSLGLETGIVSLDSRSVGGHTGQSLHP
SDGHEVQLDSGITMGSVSRVNSPIPSDGITEELAMEGVASEHRQLSNVPRSHEPLTVDGS
LPPDAVGHASVLPLHSGSLELPVVMESEHHMATRSSMSESSLSDTIHTVAMDSNPVTVAL
SSSHQLSSLTSVSLHGGSISLEPVTVSSITPEVSMGGGHVDTGNLTFVPSTLQIDSNSNK
ENMATLFTIWCTLCDRAYPSDCPEHGPVTFIPDNPIESRARLSLPKELALRQSVTGAEMG
VWAQETIPVRTCFGPLIGQESQSLEVADWTDKSASHIWKMYHNGVMEFCIITTDENECNW
MMFVRKARNPEEQNLVAYPHDGKIYFCTSHNVSPEQELLFYYSRDYARQMGLPEQPEFFV
CHCGKECHSYADFKSHVNSHLPAEPLSSGVANGLTPTKERKWKCSMCSRSFISSSKLNVH
FMGHMGMKPHKCEFCSKAFSDPSNLRTHLRIHTGQKNYRCGLCDKSFTQKAHLASHMAIH
TGEKTLKCDFCEKMFMRRHDLKQHVLTHTRERRIRCPKCDKCFSRTGHLKKHLNSHEGRR
DYVCEKCSKAFLTRYHLSRHLKICKGPSTAPLTPDTDEEEDSEDEELLGSDCVVFNTDLT
VHT
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcattacagaatgaatgagttgaacctcagcacagtggggattgaccagctgacctct
tcctccgtagccaattctttaacggtctcagggagtcatcttgggctttctggctcccct
ccacacaatactcttccagcaccaggtttaccagtggcaatacctaacctgggtccatca
ttaagctcccttccttccgctctctcagtcatgttacctatggggataggagaccgtggc
gtgatgtgtggtctcccagaaaggaactacccccttcctcctccaccttaccctcacctg
gagagcagctacttcaggcacatactgccaggaatcctctcgtacctagctgaccgcccc
ccaccgcaatacatacaccccagcccgctgaatgtagacggcaactccggcctttctgtt
tccaacgccccacagtctctggacccttttcagcctgggggatctctgggtttagagacc
ggaatagtatccctagactctcggtcggtcggtgggcacacagggcagagcctgcaccct
agcgatgggcacgaggtgcagctggactcggggattactatggggagtgtctcacgagtg
aacagtcccatcccgtctgacggcattacagaagagctggccatggaaggcgtcgcatcg
gagcacaggcagctctctaacgtcccgcgctcccacgagcccctcacagtggacggcagc
ctgccccctgatgccgtgggccatgctagtgtcttaccactgcacagtggttccttagaa
ctcccagtagttatggagtcggaacatcacatggcaacccgttcgagcatgtcggaaagc
agcctgagtgatactatccacactgtggccatggatagcaaccccgtgactgtagcgctg
tcttcttcccaccagctttcatctttaacctcagtgtccttacacgggggcagcatcagc
cttgagccagtcacggtgtcttccataaccccagaggtctccatgggaggtggacatgtt
gataccgggaacctgacctttgtcccttccaccctacagatcgactccaattctaacaag
gaaaatatggcaactctgtttacaatctggtgcacactctgcgaccgggcatacccctct
gattgccccgaacacggcccggtcacattcataccagacaaccccatcgaaagccgggcg
agattgtccctccctaaggagctggcgctgaggcagtctgtaactggggccgaaatgggt
gtatgggcacaggaaaccatcccagtcaggacctgctttgggcctctgatagggcaggag
agtcagtcgctggaggttgctgattggacggacaaatctgccagccacatctggaagatg
taccacaatggagtgatggagttctgcatcatcacgactgacgagaatgagtgtaactgg
atgatgtttgtgcgtaaggccaggaacccggaggaacagaacctcgtggcctatcctcat
gatggaaagatctacttctgcacctcccacaacgtctcgcccgaacaggaactgctcttt
tactacagtcgggactatgccaggcagatgggcctcccagaacagccagagttctttgtg
tgccactgtgggaaggagtgccactcgtacgcagatttcaagagccacgtgaatagccac
ctccctgccgagcccctgagcagcggcgtggccaatgggctgacccccaccaaggagcgg
aagtggaaatgctcaatgtgctcgcggtcctttatctcctcctccaaactcaacgttcat
ttcatgggccacatgggcatgaaaccccataagtgcgagttctgcagtaaggcatttagt
gaccccagcaacctccgtacccacctccggatacacacgggtcagaagaattaccgctgc
ggcctgtgcgacaagtcgttcacccagaaagctcacttggcctcccatatggccatacac
acgggcgagaagaccctgaaatgtgacttctgtgagaagatgttcatgcgcaggcacgac
ctgaagcagcacgtgctcacccacacccgggaacggcggatccgatgccccaagtgtgac
aaatgcttttcccgcacgggtcaccttaagaagcacctcaactcgcacgaggggaggcgg
gactacgtgtgcgagaaatgctcgaaggctttcctcacccggtatcacctctcccggcac
ctgaagatctgcaagggcccaagcaccgcccccctgacgcccgacactgacgaggaagag
gattcggaggatgaagagttactgggctcggactgcgtcgtgttcaacacagacctgacg
gtgcacacgtga
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