Xenopus tropicalis (tropical clawed frog): 779741
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Entry
779741 CDS
T01011
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
779741 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
779741 (smyd4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_10
DNA_ligase_ZBD
TPR_NPHP3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
779741
NCBI-ProteinID:
NP_001072288
Xenbase:
XB-GENE-945037
UniProt:
Q0VA10
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All DBs
Position
2:36045252..36061741
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AA seq
739 aa
AA seq
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MEHPVQEWQDQAQSIWAHLTSSEKEKFSSIADLDEIFQACLSHLQQDEEQLIERLCCNVT
VAKDPNAVQFFKEEGNKRFAEKQYATAAGLYSKAISHAKSGSEALAVCFANRSAALFYLG
QYSVCLEDIQHAQDHGYPERLRNKILQRKAECFQRLRKPSSCDPKLECVETVKPKKEPQT
STERLKEMALDRNPHITNASCALHLNFDTRKGRHLLASQNIEQGEVLIWEEAFASVIIPE
RKQWRKEIKWDTRITACDHYCHYCLNRVIASLPCQYCSFARYCSQECMDKAWRSYHYIEC
SMGDLLLALGMFCHTALRAVLVAGCRLFSQSLEQTGSADATDKTKVCNSKSTYHEKYCSS
YQSVVNLLPHTENHPAERKFLCGLTAAALYKKLCLIMAKDLVSSTSQTEKSLTKESGTIE
DWSSVRQFLGPTVLRHMLQLYCNAQAVTALQENEDESSLSLVKSNKSIRLATAVFPVLSL
LNHSCDPNTTVSFTGRFVTVRANRPIRRDEEVTHCYGPHKLRMDVAERQQLLKDQYFFVC
QCKACTEELKGKKTHGFFCPLCKAQLEGEEALYCTGARCTYTASQTQLTSRLNQLGNHIQ
IAKVQLQDNKTDNAKMTLMSCLSEAECFLSQDHLLLGEIMDHLAQAEASDGNWKAAAGHL
RKSISIVKVHYGSSSMELGHELFKLAQILFNGFEVPDAMRTIMEAQKVLSMHYGPDHNLV
QELKTMEECLLQFHGYPRK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaacatccagtgcaagagtggcaagatcaagcccaaagcatatgggcacatcttacc
tcatctgagaaagagaagttttcttctattgcagaccttgatgagatatttcaggcttgt
ttatcacatctccaacaggatgaagagcagcttatagagagactttgctgcaatgtaact
gtggccaaagaccctaatgcagtacagttcttcaaagaagaagggaacaagaggtttgct
gaaaagcagtatgcaactgcagcgggtttatattccaaggcaatctcccatgccaaatct
ggttctgaagcattggcagtatgctttgcaaacagatcagcagctctgttttaccttggt
cagtattcagtatgcctggaggatattcagcatgcacaagaccatgggtatcctgagcga
ctaaggaacaaaattcttcagagaaaggctgaatgctttcagagactgagaaagccatcc
tcatgtgaccccaaattagaatgtgttgagactgttaagcctaaaaaagagcctcaaacg
tctactgaaagactaaaagaaatggcgctggacaggaatcctcacataacaaatgcctcc
tgtgctttgcaccttaactttgacactcgcaaaggacgccatttattggcatctcagaac
attgagcaaggggaggtcctaatctgggaagaagcctttgctagtgtcattattccagag
agaaaacaatggagaaaggaaataaaatgggataccagaattacagcttgtgatcattac
tgtcactactgcttgaatagagtcatagcttccctgccctgtcagtattgcagttttgcc
agatactgtagtcaggagtgtatggataaggcctggagaagttaccactatatcgagtgt
tcaatgggtgacctgttacttgctctggggatgttttgccacacagcacttagggcagtt
cttgtagcaggctgcaggctcttttctcagtcgttagagcagactgggtctgcagatgcc
actgataaaactaaagtctgcaatagcaaaagtacctatcatgaaaagtattgcagttcc
taccagtctgtagtcaatctactcccgcacactgaaaatcacccggctgagagaaagttt
ctctgtggactcactgctgcagctttgtacaaaaaactgtgcttgataatggcaaaggat
ttggtgagttccacatcacagacagagaaatccttgacaaaagagtccggtactattgaa
gactggtcctctgtgaggcaattccttggtccaacagtactccgtcatatgctgcagctc
tattgtaatgcacaagcagtgacagcgctccaagagaatgaagatgagagcagtttgtcg
cttgtgaagagcaacaagagcattcgtcttgccactgcagtatttcctgtgctgagcctg
ctaaatcattcctgtgaccccaataccactgtgtcatttacgggaaggttcgttacggtc
agagctaataggccaattaggagagacgaggaagtgacacactgctatggtccccacaaa
ttaagaatggatgtggctgagaggcaacagttactgaaggatcaatatttttttgtgtgc
cagtgtaaagcatgtacggaggagttgaaagggaaaaaaactcatggatttttctgtccg
ctgtgcaaagcccagttagagggtgaggaggcattatactgtactggtgcaagatgtact
tatactgcgtcacagacccagttaacctcaaggctgaatcagcttgggaaccatattcaa
atagctaaggtacagctgcaggacaacaagacagataatgctaaaatgacgttgatgtcc
tgtttatcagaagcggagtgttttctctcccaggatcacctgctgttgggggagatcatg
gatcatctggctcaggctgaagcttctgatggcaattggaaagcagctgcaggacatctt
agaaagagcatcagcatagttaaagtccattatggctcctccagtatggaacttggacat
gaactctttaagctggctcagatcctatttaatgggtttgaggtgcctgatgcaatgaga
actatcatggaggctcagaaagtcctgtcgatgcactatggacctgatcacaatctagtg
caagagttgaaaactatggaggaatgtctgttacagttccatggttatcctagaaagtaa
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