Xenopus tropicalis (tropical clawed frog): 779833
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Entry
779833 CDS
T01011
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
779833 (mms19)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
779833 (mms19)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
779833 (mms19)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
779833 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
PDS5
HEAT_EF3_N
TOR1L1_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
779833
NCBI-ProteinID:
NP_001072380
Xenbase:
XB-GENE-979258
UniProt:
Q0V9L1
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All DBs
Position
7:complement(33008843..33051564)
Genome browser
AA seq
1022 aa
AA seq
DB search
MAEAHSALWGLVEEFVVGEQDSRSAEVAAGVKDGIFTVLQVVEALGSCLANPEPRSRAKG
MQLLSRVLLECYSRLTEKEVEVLVLFYENRLKDHHLITPHVLKGLMALSMCDVLPQGLAV
SVLKSVFQEVHVQSLMQIDRHTVYMIITNFMKTREEELKSLGADFTYGFIQVMDGEKDPR
NLLVAFHIVQDIITKNYALGPFVEELFEVTSCYFPIDFTPPPNDPHGITREHLIVGLRAV
LVSTSRFAEFFLPLLIEKMDSDVQSAKLDSLQTLIACCTVYGQKDLKEFLSGLWSSIRRE
VFQTASEKIEAEGLAALQALSACLSRSILSPDAEDLLDSFLNSILQDCKHHLCEPDMKLV
WPSAKLLQAAAGGSSRACWKVTANVLPLLLEQYNQHAQSSHRRTILEMTLGFLKLQSRWL
DEEDDNGLGNLKEALCTMVFSAVTDSSTQLHQVAVRTLTVLAMQQGFLSSSDIDLVVDHL
TRLILQETDSESCMAAIEASGTLAKVHPSVFISRMLPQLCANLQTEPMDINLNESRVVPE
RFIRQRCLEALAAVSTHQSILKETVPILLDYIGRVHNGEGETNAENVVSICRSLHRVAVQ
CQLDSEALQFYHEIVLPSLLSLTVQAATQDSGTSCNVLLRDDVLTAMVPVITAACTHLTP
ELASKSVSQVVALFLDGDVSLFSENNLPSNFQPFQVNGPTELQNHLVSLLMAFVCSLPRN
VEIPHLRRLLQHLLSLSLSGCSPFAYSSASKCFAGLINKCPQGDLLDDILLVTAQRIDVG
LVDEPSRTRAITLLVWVTKALVLRYHPLSGQLTNKMIGLLSDKQLGPSVANMFSLLVSDS
PDIINKACHADIRIMFRQRFFTENVPKLVQGFNSANRDDKPNYLKALSHVLNALPKQVLM
PELPSLLSLLLEALSCPDKVVQLSTLTCLEPLLQEAPETLKVHIDGLISKLVSLTLSPAM
AVRITALKCILALTKLPLHMLLPYKQQVIRALAKPLDDKKRLVRKEAVETRCQWFLLGSP
GS
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggctcacagtgctctatgggggttggtggaggagtttgtggttggagagcag
gattccaggtctgccgaagtagcagcaggtgtaaaagatgggatcttcactgtgctgcaa
gtggtggaggcacttggctcttgccttgcaaaccctgaacccagatcgcgagctaaaggc
atgcagcttctgtcaagagttttactggagtgctactccaggcttacagaaaaagaagtg
gaagtcctggttttgttttatgaaaaccgattgaaggaccatcatctcattacaccgcat
gtcctcaaaggactgatggcattgagcatgtgcgatgtgctccctcaaggtttggccgtg
tctgtgcttaaatcagtttttcaagaagtccatgttcagtctttaatgcagattgaccga
cacacagtctacatgatcatcactaatttcatgaagacacgcgaggaagagctgaagagt
cttggagctgatttcacttatggattcattcaagttatggatggagaaaaggatccacga
aacctcctagtggccttccacattgtgcaggatatcattactaagaactatgcacttggt
ccttttgtggaagagctgtttgaagtgacatcatgctattttcccatagatttcactcct
ccacccaatgatccacatggcattaccagggaacacttaatagtgggcttgagagctgtt
ctggtgtctacatcacgttttgcagagttctttctgccactcttaattgaaaaaatggac
tctgatgtgcaaagtgctaagctggattcgcttcagacactgattgcctgttgtacagtt
tatggacagaaggacctgaaagaattcctctctggtctttggtcatccatacggcgggag
gtatttcagacagcaagtgaaaagattgaggcagaaggtctagctgccctacaagcactc
tctgcctgcctttctcgctcaatactcagtcctgatgctgaggatttgctggactcattt
ttaaacagcatactgcaagattgcaagcaccatctgtgtgagccggatatgaaattggtg
tggcccagtgccaaacttttgcaagctgctgctggtgggtcttccagagcctgttggaaa
gtcacagccaatgtccttcctttgcttttggaacagtacaaccagcatgctcagagcagc
catcgcaggacaatcctagagatgacattgggcttcttgaagctgcagagcaggtggctt
gatgaagaagatgacaatggtctggggaatttaaaggaagccttgtgtaccatggtattt
tcagcagtgactgattccagcactcaactgcatcaagtggctgtgagaaccctgactgtc
ctagcgatgcagcaaggttttttgtcatccagtgatattgacctggtcgtcgatcatttg
acaagactcatcttacaggaaacagacagtgaaagctgtatggcagccattgaggcttca
ggaaccctggctaaagttcacccctcagtgtttatcagtaggatgctgccacagctctgc
gcaaacttgcaaacagaaccaatggatattaatctgaatgaaagcagagtggtccctgag
cgttttataaggcagcgatgtctagaggcattagccgctgtatccacacatcagagtatt
cttaaagaaactgttcctatcctactggactatatagggagggtgcacaatggagaaggg
gagacaaatgcagaaaatgtggtgtctatatgtaggagccttcatcgggtggctgtacag
tgccaactagattccgaggctcttcagttttaccatgaaattgtgttaccctcccttctg
tcattaactgtacaagctgcaacacaagacagcggaacttcctgcaatgttttgctgagg
gatgatgttctcactgcaatggtgccagtaattactgcagcctgcacccatctcacaccc
gagttagcctcaaaaagcgtctcccaggttgtagccttatttcttgatggggatgtttca
cttttttctgaaaacaatttaccaagcaacttccaaccattccaggtaaatggtcccacg
gagctccagaaccacttagtatcattgttaatggcatttgtttgctccttgccaagaaat
gtggaaattccacatctgagacgattgctgcagcatttgttatcattgagtctctcaggg
tgctcaccatttgcatattcctctgcctcaaaatgctttgctgggctaatcaataaatgt
ccccaaggggacctgctggatgatatacttctagtaacagctcaacggatagatgtgggg
ctggtggatgaacccagcaggactcgggccattactctcctagtctgggtaaccaaagcc
ttggtactgagataccaccctttgagtgggcagctaaccaataagatgattggtttactg
tctgataagcagctgggtccttcagtggcaaatatgttctccctgttagtatcagactcg
ccggatatcattaataaagcctgccatgcagacatccgcatcatgttccggcaaaggttc
ttcacagagaatgtcccaaagctggtgcaaggtttcaactctgccaacagagatgacaag
ccaaactacctgaaagctctctcccacgtgcttaatgcactgccaaagcaagttctcatg
ccggagcttccatcgttattatccctgttgcttgaggccttatcctgtcctgacaaagtg
gtccagttgtcaactctgacctgcttagaacctctgctgcaagaggcgccggagaccctg
aaagtgcacatagacggtcttatttccaagctcgtcagtctgaccttaagccctgcaatg
gctgttcggattacagctttgaagtgtatccttgctctcaccaagctccccttgcacatg
ctcctgccttataagcaacaggtgatccgtgccttagccaaacctctggatgacaagaaa
agactagtgaggaaggaggcagtcgagactcgctgccagtggttcttgcttggaagtcca
gggagctga
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integrated database retrieval system
