Xenopus tropicalis (tropical clawed frog): 779837
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Entry
779837 CDS
T01011
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
779837 (hfm1)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
779837 (hfm1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
779837 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
779837
NCBI-ProteinID:
NP_001072383
Xenbase:
XB-GENE-5894880
UniProt:
A2RUV5
LinkDB
All DBs
Position
4:104929830..104990827
Genome browser
AA seq
1402 aa
AA seq
DB search
MWLKAPAPGIAEIPLTQDLQNELSTEVMALKKFQQPFKESNETESKASVSCASQCGNKTK
KTSLEGMTLPFSWITNDVSQCIDLTQDEHICSLSPVTDTEENMSAFKKSLFGKYDCSLNS
EDQCLIVENGSSNFVTSKEAQKEAMKADSDICPPQQMAFNLFNETVVQKDMLNKEKFSHS
ASSNISNKDDAQYGIVTPVTEIPKQFRTVFKEFPYFNYIQSKALEHLLYSDRNFVLCAPT
GSGKTVIFELAIIRLLMQVPMPWTNVKIVYMAPIKALCGQRYDDWKAKFGPVGLNCKELT
GDTEMDDLFEIQHAHIIMTTPEKWDSMTRKWKDNTLVQLVRLFLIDEVHILKEENRGATL
EVVVSRMKTIYSLSHLSEDRKAFIPMRFVAVSATIPNVEDIADWLSDENSPGVCMKMDES
SRPVKLRKVVLGFPCSTKQSEFKFDLTLNYKIANIIQTYSDGRPTLVFCSTRKGVQQAAS
ILTKDAKFVMSIEHKQRLQKCANSIKDSKLRDVLQYGVGYHHAGVDISDRKVIENSFLIG
DLPVLFTTSTLAMGVNLPAHLVIVKSTMHYVSGMFQEYSETDILQMIGRAGRPQFDSTAT
AVIMTRLSTKEKYVHMLDGADTIESSLHKHLVEHLNAEIALHTITDVKVALEWIRSTFLY
IRALKNPAYYGFSEGLDKIGIEAKLQELCLKNLNDLSSLGLIKMDEEINFKPTETGKLMA
LYYIAFNTAKLFHTIRGTETLAELVSLISSCSEFSDVQLRANERRVLNTLNKDKNRVTIR
YPMEGKIKTKEMKVNCLIQAHLGCILVQDFSLTQDISKIFRHGTRLAKCLSEFLALQENK
FSAFLNALILTKCFKSKLWENSSHISKQLEKIGVTLANAMVNAGLTTFKKIEDTNARELE
LIVNRHPPFGNQIKESVAHLPKYEIKFQQLAKYRATTAEVVLTVLLTNFKQLQKKRTAPD
SHFVMLVIGDDDNQAIFKQKIMDSSLFKTGSWTRKIEIKRASKSTNVCLNLISSEYVGLD
IQQSFNICYLGSDSFNADLVTQHKSENIFSQEIYKTSTKTKDIADTNWSMRQTAIKCATR
ECNHNCKNKDACGHECCKVGVSEKAEMKTNFYSYLNDLRTRNSVSSATPVKRLKMQMEAE
TRNVNLQNFVFTPKPSIRSPCLKIPENILLQAESSVLTNKYKASHQEETCCKYEIKGCGE
KQTKGMPKKTCERRNLTDSDKCNSSSSENAAYVTFDLGNDIWDDFDDDNLLDASNISSLT
DQHTSEFTDVSFSKNQPVSKSSLSAGHHEEARYNAMSINKDSYRYLNAKSEVFSQENTQC
IDVVPSNQKLHGKMFSENTIKHMFTLQEETNYPVTSKMDSPHNGCWSSNIFFKTPENKTQ
ERGCYHQEDETNAFIGIFNGIF
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaggcaccagctccgggcattgctgaaattccacttactcaggatcttcaa
aatgagttatcaacagaggtaatggcactaaagaagtttcagcaaccatttaaagaaagt
aatgaaacagaaagtaaagcttctgtttcatgtgcctcccagtgtggaaacaaaacaaaa
aaaacaagcttggagggcatgacattaccattttcatggattacaaatgatgtttcccaa
tgtatagatttaacgcaggatgaacatatctgttcattaagcccagttacagatactgag
gaaaatatgagtgcattcaaaaaaagcttgtttgggaaatatgattgttctttaaacagt
gaagaccaatgtcttatagtggaaaatgggagttctaattttgtaacctcaaaagaagca
caaaaagaagcaatgaaagcagattctgacatatgcccacctcagcaaatggctttcaat
ttatttaatgaaactgtagttcaaaaggacatgctgaataaggagaaattttctcactct
gcttcttcaaatatctctaacaaagatgatgcacaatatggaattgttacacctgtcaca
gaaatccctaagcaattccggactgtcttcaaagaatttccatactttaattatatacag
tcgaaagcattggagcatcttctttattcagacagaaactttgtgctttgtgctccaact
ggatctggaaagacagttatatttgaacttgcaattattcgattgctaatgcaagtgcca
atgccttggacaaatgttaaaatagtatacatggcaccaatcaaagctttatgtggtcag
agatatgatgactggaaagcaaaatttggaccagttggtttgaattgcaaagagttaact
ggtgatactgaaatggatgatctttttgaaattcagcatgcacacatcatcatgacaact
ccagaaaaatgggatagtatgacgagaaaatggaaagataatactttggttcagcttgta
cgtttgtttctgattgatgaggtgcatattttgaaggaagaaaatcgaggtgcaacactt
gaggttgtcgtcagcagaatgaaaacaatctattctctttctcatttgtcagaagataga
aaggcattcataccgatgagatttgtggcagtttctgcaaccattcctaatgtggaagat
atagcagattggttgtcggatgaaaacagtcctggtgtatgcatgaaaatggatgaatca
agcagaccagtgaaactgcgcaaagtggtgttaggctttccttgcagcaccaagcagtca
gagttcaagtttgatctaacactaaattacaaaatagctaatataatacaaacctattca
gatgggagaccaacccttgtgttttgttctacaaggaaaggagtacaacaagcagcgtct
attctaaccaaagatgcaaagtttgtaatgagcattgaacacaagcagaggcttcagaaa
tgtgctaattcaattaaagattctaagctaagagatgttttacaatatggtgttggttac
caccatgctggtgttgatatatctgacaggaaagtcattgaaaactcttttttaattgga
gatcttccagtacttttcaccacaagtaccttagctatgggagtaaaccttccagctcat
ttagttattgtaaaatcaacaatgcattatgtctctggaatgtttcaagaatatagtgag
acagatattcttcagatgattggaagagctggaagacctcagtttgattctacagccaca
gccgtcattatgaccagattaagcaccaaagaaaaatatgtacacatgttagatggtgca
gatacaatagaaagcagcttgcacaagcatcttgttgagcatctgaatgcagaaatagca
ctgcacaccattacagatgttaaagttgctttggagtggataagatcgactttcttgtat
atcagagcgctgaagaacccagcttattatggcttttctgaaggattagacaagattgga
attgaagcaaaattgcaagaattgtgcttaaaaaatctaaatgatttgtcttctctggga
ttaattaaaatggatgaagaaattaattttaaacccacagaaactggaaaactgatggct
ctgtattacattgcatttaacacagcaaaattgtttcatacaattagaggaacagaaaca
ctagctgaattggtgtcactgatatcatcatgttcagaattctcagatgtgcagctaaga
gcaaatgaaagaagagttttgaacactttaaataaagacaagaacagagtaactattaga
tatccaatggaagggaagattaaaaccaaagaaatgaaagttaactgccttattcaagct
catcttgggtgcattcttgttcaagacttctctctgacacaagatatttcaaagattttc
aggcatggcacacgattggctaaatgtttatcagagtttcttgcattgcaagaaaacaag
ttctctgcatttctaaatgcactaattttgaccaagtgtttcaaaagcaaactttgggaa
aattcatcacacatttctaagcaactggaaaaaattggtgtcactctggcaaatgcaatg
gtaaatgcaggacttacaacatttaaaaaaatagaagatacaaatgccagagaacttgaa
ttgattgtcaataggcacccaccctttggaaatcaaataaaagaatctgttgcacacctt
ccaaagtatgaaataaagttccagcagctagcaaagtacagagctacaactgcagaagtt
gttttgactgttctcttgacaaatttcaagcagctgcagaagaaaagaacagctccagat
tcacattttgtaatgcttgttattggagatgatgataatcaagctatcttcaaacagaaa
attatggactcctctctttttaaaactggaagttggacaagaaaaattgaaatcaaaaga
gcatctaaatcaactaatgtttgcttgaatctcatcagctcagaatatgttggccttgac
atccaacaaagtttcaacatttgctatctgggatcagacagttttaatgcagatctggtg
actcagcataaatctgaaaatatattttcacaagaaatatataaaacttccacaaaaact
aaagatattgctgatactaattggtctatgagacagacagccataaaatgtgctactaga
gaatgtaatcataattgcaagaataaagatgcctgtggacatgaatgctgtaaagttgga
gtgtctgagaaggctgagatgaagacaaacttctattcttacctaaatgatctaaggact
cgaaattcagtttcatcagctacaccagtgaaaagactaaagatgcagatggaagctgaa
actaggaatgtgaatttacagaactttgtcttcacgccaaaaccttcaataaggtcacca
tgtctgaaaattcctgaaaacattttacttcaagcagagtcttctgttttgacaaacaaa
tataaagcttcacatcaagaagaaacatgttgtaaatatgaaattaaaggttgcggagaa
aagcaaacaaaagggatgccaaaaaaaacatgtgaaaggagaaatctcactgattcagac
aaatgcaactcatcgtcatcagagaacgcagcatacgtgacatttgacttgggcaatgac
atatgggatgattttgatgatgataatcttttagatgctagtaatatttcaagtttaact
gaccaacacacttcagaatttacagacgtctcgttcagtaagaaccaacctgtatcaaag
tcctcattgtcagcaggacaccatgaagaagcaagatacaatgcaatgagtataaacaag
gattcctatagatatttaaatgctaagtcagaagttttttctcaagaaaacacccagtgc
attgatgttgtaccatcaaatcaaaaattacatggaaagatgttttctgagaatactata
aaacatatgtttacccttcaagaagaaaccaattaccctgttacctccaaaatggattct
ccacacaatggttgctggtcaagtaacatttttttcaagactccagaaaataaaacacaa
gagagaggatgttatcatcaggaagatgaaacaaatgctttcattggaatatttaatgga
atattttaa
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integrated database retrieval system
