Xenopus tropicalis (tropical clawed frog): 779934
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Entry
779934 CDS
T01011
Symbol
ptbp2
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
779934 (ptbp2)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
779934 (ptbp2)
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Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
Peptidase_M9_N
RRM_Nup35
MSP1a
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
779934
NCBI-ProteinID:
NP_001072479
Xenbase:
XB-GENE-491012
UniProt:
Q0P4U3
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All DBs
Position
4:102121310..102152121
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AA seq
531 aa
AA seq
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MDGIVTDVPVGVKRGSDELLSGSVLNGPSSNMSSVVVTANGNDNKKFKGDDKMEAAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPH
LRNQPIYIQYSNHKELKTDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSL
LAVPGALSPLGIPNAAAAAAAAAASRVGMHGVSTGGNTVLLVSNLNEEMVSPQSLFTLFG
VYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPRE
GLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTGG
NVKAFKFFQDHKMALLQMSTVEEAIQALIDLHNYNIGDNHHLRVSFSKSTI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattgtcactgatgtgccagttggcgttaagagaggatcagacgagttactg
tcaggaagtgtgcttaacgggccaagctccaatatgagcagtgtagttgtaactgccaat
ggtaatgataataaaaagtttaaaggagatgataaaatggaagctgcaccgtcaagagtc
ctacatattcgaaaacttcctggggaagtaactgaaacagaagttattgcattgggctta
ccttttggaaaagtcaccaatattctcatgcttaaaggaaagaatcaggcatttttggaa
ttagccactgaagaagcagcctctaccatggtcaattactacaccactataacccctcat
ttacgcaatcaacctatctatattcaatattctaatcacaaagaacttaagacagacagt
gcgctaaatcagcgtgctcaggcagttctgcaggctgtaacagcagtacagacatctaat
tccagtgtgaccagcactgctgcaaatgagaatacagtgtcttcagcacaaagtccagtg
ctgcgaataatcattgataatatgtactatcctgtgactcttgatgtcttacaccagata
ttttccaaatttggcacagtgttgaagattattacatttacaaaaaataatcagtttcaa
gctctactacaatatggtgatcctgttaatgcacaacaagcaaaactcgccctagatgga
caaaatatttataatgcatgctgtacccttcggattgatttttctaaactggtaaattta
aatgttaagtacaataacgataaaagtcgtgactatactcgtcctgatcttccttctggt
gatgggcaacctgcacttgatccagctattgctgctgcttttgcaaaggaaacatcactt
ctcgctgttcctggtgcattgagtccgttggggattccaaatgctgcagcagctgcagcc
gctgcagctgccagccgtgttggtatgcatggagtctccactggtggcaatactgtgctt
ctcgtaagcaatttaaatgaagagatggtttcgccccaaagtctgtttaccctcttcggt
gtttatggagatgtgcaacgtgtgaaaattctgtacaataagaaagatagcgctcttata
caaatggcagatgggaaccaatcacagcttgcaatgagtcatcttaatggacaaaaaatg
tatggaaaaattattcgggtaaccctgtctaagcatcagacagtccagctacctcgggaa
ggtcttgatgatcaagggcttacaaaagattttagcaattctccattacatcgttttaaa
aaacctggttcaaagaactttcagaatatatttccgccctctgcaactctccacttgtct
aatataccgcaaaatatcacagaagatgatttgcgaactctctttacaaacacaggaggc
aatgtcaaagcattcaagttttttcaagaccataagatggccctgctgcagatgtctaca
gttgaagaagcaatacaggctttgattgaccttcacaactacaacattggagataaccac
catctgagagtttcattttcgaagtcaactatttaa
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