Xenopus tropicalis (tropical clawed frog): 779959
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Entry
779959 CDS
T01011
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
779959 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
779959 (vps45)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
779959 (vps45)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
779959
NCBI-ProteinID:
NP_001072504
Xenbase:
XB-GENE-961682
UniProt:
Q0D2D9
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Position
8:129039592..129078525
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AA seq
570 aa
AA seq
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MNVVLAVKQYVSKMIEDSGPGMKVLLMDKETTSVVSMVYTQSEILQKEVYLFERIDSTNR
ESMKHLKAICFLRPTKENVEYLIKELRRPKYSVYFLYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNIVGCYQGRNWDAVHLYRTTQGLTALLLSLKKCPMIRYQLS
SDMAKRLAEGVKQVITKEYELFEFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHEML
GINNNRIDLSRVPGISKDLKEVVLSAENDEFYANNMYLNFGEIGTNIKNLMEDFQKKKPK
GQQKLESISDMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSNALQNVKRLLQNQRLAELDATRLVMLYALHYERHSSNALSSLLNDLRVRGVSEKYR
RLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFFKGLKGVENVYTQHQPFLLDTLDQLIKG
KLKDNLYPYLGPNTLRDRPQDIIVFMVGGATYEEAFAVYNLNRTTPGVRIVLGGTAIHNT
KSFLEEVQSAGFPGRSGESYQPASKSSVRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggtactggcagtcaagcagtatgtgtccaagatgatagaggacagtgggcct
ggcatgaaggtgctgctcatggacaaggagacgaccagcgtggtgagcatggtgtacaca
cagtctgagatcctgcagaaggaagtctatctattcgaacgtatagattccaccaaccga
gagagcatgaagcacctgaaagccatatgtttcctgaggcccactaaggaaaatgtggaa
tatttgatcaaggagctgcgcaggcccaaatacagcgtctatttcctctacttcagcaat
gtgatcagcaaaagcgatgtgaagtccctggcagaggcagatgagcaggaagtagtggct
gaggttcaggaattctatggagactatattgctgtaaacccccacgtcttttctcttaac
atcgtgggctgttatcagggacgtaactgggatgcagtccacctatacagaacaactcaa
ggactgactgccttgttgctgtctctaaagaagtgccccatgatccgataccagctgtct
tcagacatggctaagagactggctgaaggcgtgaagcaagtcatcacaaaggaatatgag
ttgttcgagtttcgtcggactgaggttccacctttgctgcttatactagaccgctccgat
gatgccatcacaccgctactaaaccagtggacgtaccaagccatggtccacgaaatgctg
ggcatcaataataatcgtattgacctgtctcgcgtgccagggataagcaaggacctgaag
gaggtggtgttgtctgcagagaatgatgagttttatgccaataacatgtacctgaacttt
ggagaaatcggaacaaacatcaagaatctaatggaagattttcagaagaagaaacccaaa
ggccaacagaaactggagtctatttctgacatgaaggcttttgtagaaaactacccacag
ttcaagaaaatgtcaggtactgtgtccaaacatgtgacggtggttggagaactgtcccgc
ttggtcagcgaaaggcatctcatggaggtgtcagaagtggagcaggaactggcctgccag
aatgaccactccaatgccctgcagaatgtgaaacgccttcttcagaaccagcgcttagcg
gagttggatgctacacgactggtcatgctgtatgctctgcactatgaaaggcacagcagt
aacgctctgtcaagccttttaaatgacctcagagtccgaggggtatctgaaaagtaccgc
aggctggtgtctgcggtggtggaatatggtggaaagagagtaagagggagcgacctgttt
agcccaaaggatgccgtggcaatcaccaaacagttctttaaagggctaaagggagtggaa
aatgtctacactcagcatcagccgtttctcctcgacactttggatcagctcatcaaggga
aagctgaaggacaatctgtatccatacctgggtcctaacaccctccgagacaggcctcaa
gacatcattgtgtttatggttggaggagcaacatatgaggaagcctttgccgtttataat
ctgaaccgcacaacaccaggggtccgtatcgtgctaggtggaactgccattcataacact
aagagtttcctggaggaagtgcaatcggccgggttcccgggtcggtctggggaaagctat
cagcctgcttcgaagtcatcagtcaggcgatga
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