Xenopus tropicalis (tropical clawed frog): 780045
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Entry
780045 CDS
T01011
Symbol
lin54
Name
(RefSeq) protein lin-54 homolog
KO
K21776
protein lin-54
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
780045 (lin54)
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Gene cluster
GFIT
Motif
Pfam:
TCR
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
780045
NCBI-ProteinID:
NP_001072590
Xenbase:
XB-GENE-5752559
UniProt:
Q0IHV2
A0A8J1JIK1
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All DBs
Position
1:85262298..85328035
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AA seq
741 aa
AA seq
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MDVVSTDVNNVLPDEIMETGISLVDDDSIEAITISSPMVDEAPMETELERIVEVSSSGEC
VSTAVVKEAVASTSNNAGHLAVVSVASKPESGPSAAAMKTVLQTHFHKLATPISGQVVLN
KVSQASDLTAGSHVVKQEGQKLIVTTLGKSSHPIVLTLPQSHIGNAQTPVTHVQRIESKV
TPQQIKLVTIGGNRSDGNPVLGMSALTSAQIISPSTKSPVLQTQQIKTLQIAKKAPTSSG
PVITKLIIAKPLNSKPLTEQTTQIASSFAGGPALSQTNPGTPPKALNIADIGVIGTPSAK
TTNKIAISPLKSPSKGVKSSVGGINTPQFKTIIPLAAAPNVQQIQVPGSKFHYVRLVTAS
TASNTTPSSQIQSTSTQPLQQAKPVVVNATPVRMSVPIIPAQTVKQVVPKPLNAASQIVT
TSQPQQRLLMPATPLAQIQPSLTNLPAGTVLASAPGTGNVGYAVLPAQYVTQLQQSSYVS
IASNAGLSGTTAAQNQPRGPLNGIISSESASRPRKPCNCTKSLCLKLYCDCFANGEFCNN
CNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLK
NYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISD
LLTRPAPPMNSGGGKLPFTFVTKEVAEATCECLLAQAEQAEKQLKSKAATERMILEEFGR
CLMRVINSAGKAKTDPCPMSC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtgtctactgatgttaacaatgtcctccctgatgagattatggagacagga
atttccttggtggatgatgacagcattgaagctatcacaatatcctcgcctatggtggat
gaagcccccatggaaacagaactggagcgcattgtggaagtgagcagtagtggtgaatgt
gtttctacagcagtagtgaaagaagcagttgcatcaactagcaacaatgctggacactta
gcagtggttagtgttgcttcaaagccagaatctggaccttcagccgcagccatgaaaact
gtattacagacgcactttcacaaactggctactcctatatctggtcaggtggtacttaat
aaggtttcacaggcttctgatcttacagccggaagtcatgttgtgaagcaggaagggcag
aaactgattgttacaactctgggaaaatcaagccaccccattgttctgacattgccacag
agtcacattggaaatgcacagacaccagttactcacgttcaacgtatagaatctaaagtg
acaccacagcagattaagcttgtaaccatcggtggaaacagatctgatggaaatcctgtc
cttggaatgtctgcattaacatctgcacaaatcatcagcccctctaccaagtccccagtg
ttacagacccagcagatcaagactttacagattgcaaaaaaagctcctacatcatctggg
ccggtgattactaagctgatcattgcaaagcctttgaatagtaaaccactcacagagcag
actacacaaatagcatcttcttttgctggaggtccagccctctcacaaactaatcctgga
acaccacccaaagcattaaacattgctgatattggagtgattggtacaccctcagctaaa
actacaaacaaaattgctatatcaccactgaaatctcctagtaagggtgtaaaatcatct
gttggcggcatcaacacacctcagtttaagaccataattcctcttgctgctgccccaaat
gttcagcagatccaggttcctggaagtaaatttcactatgtccggcttgtcacagcatct
acagccagcaacacaacaccgtccagccagatccaaagcaccagcacgcaacctctacag
caagctaaaccagtggttgttaatgcaacgcctgtgaggatgtctgttcccattattcca
gcacagactgtcaaacaagttgttcccaagccattaaatgcagcttcccagattgtcaca
acaagccagccacagcagcggcttcttatgccagctacgccacttgcacaaatacagccc
agccttacgaaccttccagcaggcactgtgttagcctctgcaccagggactggaaatgta
ggttatgctgtcctacctgctcagtatgtcactcagttgcagcagtcctcgtatgtttct
atagcaagcaatgcagggttatcaggaacaacagctgctcagaatcagccaagagggcca
ttgaatgggatcatttcttcggagtcagcaagtcgtccaaggaaaccatgtaactgtaca
aagtctttatgtctaaagctgtactgcgactgttttgccaatggagaattctgcaataac
tgcaactgtacgaattgctacaataatctggagcatgaaaatgaacgacaaaaagcaatc
aaggcatgcttggatagaaacccagaagcattcaagccaaagattggcaaaggaaaagaa
ggagaatctgacaggagacacagcaagggctgcaactgcaaacgttcaggctgccttaaa
aactattgtgaatgttatgaggctaaaattatgtgctcttcaatatgtaagtgcataggc
tgcaaaaactttgaagagagtccagagcgtaaaacattgatgcatttggcagatgcagca
gaagtgagggttcagcagcaaactgcggccaagacaaagctttcctcacagatatctgat
ctacttaccagaccagcaccaccaatgaatagtggaggtggcaaactccctttcacgttt
gtaacgaaagaagtagcagaagcaacatgtgaatgcctcttggcccaagcagaacaggca
gaaaagcaattaaaatcgaaggcagccactgaacgaatgatcctggaggagtttggccgc
tgtttaatgagagtgattaactctgcaggaaaagcaaaaactgacccttgtcccatgagt
tgctaa
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