Xenopus tropicalis (tropical clawed frog): 780049
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Entry
780049 CDS
T01011
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
780049 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
780049 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_5
LRR_NXF1-5
LRR_At5g56370
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
780049
NCBI-ProteinID:
NP_001072594
Xenbase:
XB-GENE-956973
UniProt:
Q0IHU8
LinkDB
All DBs
Position
4:complement(82816269..83033098)
Genome browser
AA seq
1388 aa
AA seq
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MGNLSSLQLQCLEMTTKRKIIGRLVPCRCFRGEEEIISVLDYSHCSLQQVPKEVFSLERT
LEELYLDANQIEELPKQLFSCQALRKLSIQDNDLSNLPTTIASLVNLKELDISKNGIQEF
PENIKCCKCLTIVEASVNPISKLPDGFTQLLNLTQLYLNDAFLEYLPANFGRLSKLRILE
LRENHLKTLPKSMSKLAQLERLDLGNNEFTELPEGLELIQNLKELWIDNNSLQTLPGATG
KLKQLIYLDMSKNRIESVDTDISGCESLEDLLLSSNLLQQLPDSIGLLKKLTNLKVDDNQ
LVALPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLTELPREIGNCKNV
TVMSLRTNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKALI
PLQTEAHPDTKQRVLTNYMFPQQPRGDEDFQSDSDSFNPTLWEEQRQQRMTVAFDFEEKK
EEEEAPGKLKVEINLKRYPTPYPEDLKNMVKSVQNLVVKGSLGSSLENSIPTPSAEQNLK
EKYEHKWPVSTKEMKSEVSNREHKEFQKSQISDSGNIRSFSVDVPKRKEKEEHSERPEQE
AFVHRPNEMRIAELRPSLIETPLYPPKLVLLGKDKKESTDESEADKHHHNSVSSGTYSDY
SPSQASSGSSNARVKVQISAKEAVNSSLWGNRLTQSFPQPLETKPLLSQRESAPVGNLQQ
RNDRQALNDSFTENWNDSPHYDNTGFVAEENVVENPSSNPMLNAKSRSTSAHGRRPLIRQ
DRIVGIPLELEQPAQRNSQESDVANPWQNWTRTPSPFEDRTAFPSKLESTPVSSPLPERK
EHKQQSLETPSTYSSGATWEFHDSSTSRSMGNVFSHNHCRPESAKNSVSVSKSTERLSPL
MKDLKTGRFKKSQSIDEIDIGAMKVYNIPLQHYDPRNVMQGSHERQDLGMVQEQSMSRSQ
SVPMLDDELLGYGSSRGHQQKHVTKKVYQFDQSFNPQGAVEVKPEKRVPAPFSYNQEYAA
QTKTIAKDLISPRGYRGYPPMEQIFSFSQPSVNEDSVPPQFTSQGSRPGFLKRADSLASA
TEMAMYRRVSEPHEPPQTDRYGRPPFLGAMDRQSSMSVAESQFLKRNGRYEDDHSLYPEM
KSQSGSYQVKTLTQRRPLSARSYSTETYGTTQTRPVSARPTMAALLEKIPSDYNLVNYGE
KSFENSDIKSRQNAGKLEESCNKMPADWRQQLLRHIEARRLDRTPSQQSNILDNGQEDMS
LGQWNPYPLGRRDVPPENITKKAGSHIQTLMGSQSLQHRSREQQHYEGGMNKVTIQQYQS
PLPIQIPSAQRGPQSGRCLIQTKGQRSMDGYPEQYCVRIEKNPGLGFSISGGLSGQGNPF
KPSDKGSA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatttatcgtccctccaattgcagtgcctggagatgacaactaagcggaaaatt
attgggaggctggtcccatgcaggtgttttcggggtgaagaggaaattatatcggtgttg
gattattcccactgcagccttcagcaggtgccaaaggaggtgttcagtttggaaagaaca
ttagaggagctttatcttgatgctaatcaaattgaagagttacctaagcaattgttcagt
tgccaggcccttcggaagctgagtatacaagacaatgatctttcaaacctgccaaccact
attgcaagtttagtgaatctcaaagagttggatatcagcaagaatggaattcaagaattc
ccagaaaacatcaaatgctgcaaatgcttaaccatagttgaagccagcgtgaaccccatt
tcaaagctcccagatggttttactcagcttcttaacttgactcagctgtaccttaatgat
gcctttcttgagtatcttcctgctaactttggaaggctcagcaaattgcggatattggaa
ttaagagaaaaccatttgaaaacattaccaaagtctatgagtaaacttgcccagctggag
aggcttgatctaggcaataatgagtttacagaactgccagaaggcctggaactaatacag
aacttaaaggaattatggatagacaacaattcccttcaaacactgcctggggctacagga
aagttaaagcagttaatatacctggacatgtcaaagaaccgcattgaaagtgtagacaca
gatatatctgggtgcgaatcccttgaagatctcttactttcctccaatttattacaacag
ttacctgattctataggtctcttgaaaaaacttacaaatctgaaagtagatgacaatcaa
cttgtagcattaccaaatacaattggaaatttatctttattagaagagtttgattgcagc
tgtaacgagctggagtctttgccgcccactataggatacctgcatagtctccgaacatta
gcagttgatgaaaatttcctcacagagttgcccagggaaattgggaactgcaagaatgtc
accgtaatgtcacttcggactaataagctggagttccttcctgaagagattggacagatg
caaaaattgagagtgttaaacttgagcgataacaggctgaagaatttgccattcagtttc
actaaacttaaagaacttgctgctctgtggctttctgacaatcagtccaaagcactcatt
cctcttcaaactgaagctcacccggatacaaaacaaagggtattaacaaattatatgttc
ccgcagcaaccgcgtggtgatgaagatttccagtcagacagtgacagctttaaccccaca
ctttgggaggaacagcggcagcaacgaatgacagtcgcatttgattttgaagaaaagaaa
gaagaagaagaagccccaggaaaactcaaagtggaaattaatctaaaacgctacccaaca
ccatatcctgaagatttaaaaaatatggtcaaatcggtgcaaaacttggtagtcaaagga
agccttggatcatcattggaaaattccataccaacaccaagtgctgaacaaaatctcaag
gaaaaatatgagcataagtggccagtatcaacaaaggaaatgaagtctgaggtgtcaaat
cgggaacataaggagttccaaaaaagccaaatatcagactcaggcaatattcgtagcttt
tctgtggatgtacctaaaaggaaggaaaaggaggaacattcagagagaccagagcaggaa
gcttttgtgcatcgtccaaatgagatgagaatagcagagcttcgtccttccttaattgaa
actccattatacccacccaaactggtattgttgggaaaagataaaaaagagtctacagat
gagtctgaggctgataaacatcatcataacagcgtttcttcaggcacctactcagactat
tctccttctcaagcatcttcgggatcatctaatgctcgggtcaaagtgcagatttcagct
aaggaagcagtaaatagttctttgtggggtaacagacttacccagtcattcccacagcca
cttgaaacaaagccattactgagtcagcgagagtcagcaccggttgggaatttacaacag
cgaaatgatagacaagctctcaatgactcctttactgagaactggaatgatagcccacac
tatgataacactggttttgttgcagaagaaaatgtagtagagaatccaagcagtaaccca
atgctaaatgcaaaatcaagaagcacatctgctcatggacgcaggccattaattagacaa
gacagaatagtgggtattcctttggaactggaacagcctgcacaaagaaattcccaagaa
tcagatgtggccaatccttggcagaactggactagaactccaagtccttttgaagacagg
actgcctttccttctaaactagaaagcactcctgtcagtagtccattgccagaaaggaag
gaacataaacagcagtctcttgaaaccccaagcacatattcatcaggggcaacctgggag
tttcatgattcaagtaccagtaggagtatggggaatgtattttcacataaccattgtcgt
ccagagtctgccaaaaactctgtatcagtgagcaaaagtactgagaggctgtcaccatta
atgaaagatttaaagactggccggtttaaaaagtcacagagcatagatgaaatagatata
ggtgcaatgaaagtgtataacataccactgcaacattatgacccaagaaatgtcatgcaa
ggaagtcatgaaagacaagacttagggatggtgcaggagcagagtatgtcacgcagtcag
tcagtaccaatgcttgatgatgaactgcttggttacggaagcagcagggggcatcagcaa
aaacatgtaactaaaaaagtgtatcagtttgaccaaagttttaaccctcaaggagcagta
gaggtgaagccagaaaaaagagtacctgcacctttttcatacaatcaagaatatgctgca
cagacaaaaacaattgcaaaggatttgatcagcccaaggggctacagaggttatccccct
atggagcagatcttttctttttctcagccatctgtcaatgaagattcagttccaccccaa
tttacaagtcaagggtcaaggccagggtttttgaaaagagcagattcattagcaagtgcc
actgaaatggcaatgtataggagagtcagtgagccgcatgaacctccacagactgataga
tatggcaggcctccttttcttggggctatggaccgccaaagtagcatgtcagtagctgag
tcacagtttctgaaaaggaatggaaggtatgaagatgatcatagcttatacccagaaatg
aaatctcaaagtggtagttatcaagttaaaacccttacacaaagaaggccattatctgca
agaagctacagtacagagacctatggaaccactcaaacaagacctgtttctgcaaggccc
acaatggcagctctgcttgaaaagattccatctgattataatctggttaactatggtgaa
aaatcatttgaaaacagtgatataaagtcaaggcaaaatgctggaaaattagaagaaagc
tgcaataagatgcctgcagactggagacaacaactccttagacatatagaagctagaagg
ttagacaggacgccatcacagcaaagcaacattttagacaatggacaggaagacatgtct
ttgggtcaatggaacccttatccgctgggtcgaagggatgtaccacctgaaaatatcaca
aaaaaggcaggtagccatatacagacattaatgggatcccagagcctgcagcataggtcc
agagagcagcagcactatgaagggggtatgaataaagtcaccatccagcagtaccagtca
ccacttcctattcagatcccttctgctcagcgaggtcctcagtcaggaaggtgtttgatc
caaactaaagggcaacggagtatggatggataccctgagcagtactgtgtgagaatagaa
aagaaccctgggcttggatttagcatcagtggcgggttaagtgggcaaggcaatcctttc
aagccgtctgacaagggttcagcctga
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