Xenopus tropicalis (tropical clawed frog): 780120
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Entry
780120 CDS
T01011
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
780120 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
780120 (rora)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
780120 (rora)
Nuclear receptors [BR:
xtr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
780120 (rora)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Motif
Other DBs
NCBI-GeneID:
780120
NCBI-ProteinID:
NP_001072663
Xenbase:
XB-GENE-478535
UniProt:
Q08D40
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Position
3:complement(93550909..93606890)
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AA seq
267 aa
AA seq
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MYYVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCL
IDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQRDHQQPPG
EAEPLNPAGYGLTPNGLTELRDDLGGYMEEESKNDSTVNSFYLDIQPSPDQSGLDVNGIK
PEPLCDYTPASSFFPYCSFTNGETSPTISMAELEHLAQNISKSHMETCQYLREELQQLMW
QTFLQEEIDNYQSKVRGTDRRQSAKNL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtattatgtgatcgccgccatgaaagctcaaattgaaataattccatgcaaaatctgt
ggagacaaatcttcagggattcattatggggtcatcacgtgcgagggttgtaagggtttc
ttccgacgaagccagcagagcaatgcaacttactcatgtccacgccagaaaaactgtttg
attgataggacaagcaggaatcgttgtcagcattgtcggctgcagaaatgcctcgctgtg
ggcatgtcccgggatgctgtaaagtttggtcgtatgtccaaaaagcagagggacagtttg
tatgcagaggtacaaaaacatcgcatgcagcaacagagagaccaccagcagcctccagga
gaggcagaacctttgaatcctgcaggttatgggctcaccccaaatggtctcactgaactt
cgggatgacttgggtggatacatggaagaggaaagcaaaaatgattcaactgtaaacagc
ttttatttagatatccagccatcccctgatcagtcaggcctggatgttaatggcataaaa
ccagaacccctttgtgactatactcctgcatcttctttcttcccatactgttccttcacc
aacggcgagacatccccaacaatttctatggcagaacttgaacatcttgctcagaatatc
tctaagtcccacatggagacttgccagtatttacgggaagagcttcagcagcttatgtgg
cagactttccttcaggaagagattgataactaccagagcaaggtaaggggcacagataga
aggcagagtgccaaaaacctgtaa
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