Xenopus tropicalis (tropical clawed frog): 780179
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Entry
780179 CDS
T01011
Symbol
kdsr
Name
(RefSeq) 3-ketodihydrosphingosine reductase precursor
KO
K04708
3-dehydrosphinganine reductase [EC:
1.1.1.102
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00600
Sphingolipid metabolism
xtr01100
Metabolic pathways
xtr04382
Cornified envelope formation
Module
xtr_M00094
Ceramide biosynthesis
xtr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
780179 (kdsr)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
780179 (kdsr)
Enzymes [BR:
xtr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.102 3-dehydrosphinganine reductase
780179 (kdsr)
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Motif
Pfam:
adh_short
adh_short_C2
KR
Polysacc_synt_2
THF_DHG_CYH_C
NAD_binding_10
Epimerase
RapZ-like_N
Motif
Other DBs
NCBI-GeneID:
780179
NCBI-ProteinID:
NP_001072722
Xenbase:
XB-GENE-985089
UniProt:
A0JM07
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Position
6:complement(85844244..85876031)
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AA seq
332 aa
AA seq
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MLLLAAAFLVAFVLLLYMVSPLISPKPLKLAGAHVVVTGGSSGIGKCVAVECFKQGAFIT
LVARDEGKLVQAKKEIEKYSINDKQVVLCISVDISKDYRQVENVIKQAQEKLGPVDMLVN
CAGMAIAGNFEEIEIDKFARLMEINYLGSVYPSRAVISTMKERRMGRIVFVSSQAGQLGL
FGYTAYSPTKFALRGLAEALQMEVKPYNIYVTVAYPPDTDTPGFAEENKTKPLETKLISE
SSSLCQADQVARVIVKDAIQGNFNSSVGSDGYMLSSLTCGMSPVTTITEGLQQVVTMGLF
RIIALFYLGSFDSIVRRCMIQKHNSQKSCKTD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggctgccgccttcctagtggcatttgtgcttctgctctatatggtgtcc
cccctcatcagtcccaaacctcttaaattggctggagcacacgtggtggtgactggtgga
tccagtggcattgggaagtgtgtggccgtggaatgcttcaaacaaggtgcctttataact
ctggttgcacgagatgaaggcaagctggttcaagctaagaaagagatagaaaaatattca
ataaatgataagcaggttgtattgtgtatatcagtagatatatccaaagactacagacaa
gtggagaatgtcattaaacaggctcaagaaaaattaggtcctgtggacatgttagtgaac
tgtgcgggtatggcaattgctggaaattttgaagaaatagagattgataagtttgctagg
ctgatggaaatcaattatctgggtagtgtgtatcccagccgagctgtgatatctaccatg
aaggagagaaggatgggaaggatagtatttgtctcatctcaggctgggcagctgggacta
tttggctacacagcctattcccctacaaagtttgctcttcggggtctggcagaagcctta
caaatggaggtgaagccgtacaacatttatgtgactgtggcttatcctccggacactgac
acacctgggtttgctgaagaaaataaaacaaagcctttggagaccaagttaatatcagaa
tcttcaagtctctgtcaagcagaccaagtagccagagtgatagttaaagatgctattcaa
ggtaatttcaatagttcagttggctcagatggttatatgctgtcctccctaacatgtggg
atgtcccctgtaacaaccatcacagaagggcttcagcaggttgtcacaatgggcctgttt
cgcatcattgctttattctaccttggaagttttgatagcattgtacgtcgctgcatgata
cagaagcacaactcgcagaaatcctgtaaaacagattaa
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