Xenopus tropicalis (tropical clawed frog): 780208
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Entry
780208 CDS
T01011
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4
KO
K25780
kelch domain-containing protein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
780208 (khdc4)
Spliceosome [BR:
xtr03041
]
Complex B
Other components
Prp19-related factors
780208 (khdc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
RxLR_effector
Motif
Other DBs
NCBI-GeneID:
780208
NCBI-ProteinID:
NP_001072751
Xenbase:
XB-GENE-5957982
UniProt:
A0JM64
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Position
8:complement(137950462..137961835)
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AA seq
612 aa
AA seq
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MSAGSGRRSKWDQPGPPSTTLLLPGVLPAIVPFTAGAFLSPPEMPPVTATCESVSAPSGA
LDAAAAVAAKINAMLMAKGKIKPTQNAPEKVQVPGKAPSAAKSKDDLVVAEVEINDVPLT
CRNLLTRGQTQDEISRMSGAAVSTRGRYMTAEEKAKIGPGDRPLYLHVQGQTRELVDRAV
NRIKEIITNGVVKAATGSSPTFNGATVTVYHQPAPVAPVAPPKPQFQSGMHYVQDKLFVG
LEHAVATFNVKEKVEGPGCSYLQHIQLETGAKVFLRGKGSGCIEPASGREAFEPMYIYIS
HPKPEGLAAAKKLCENLLQTVHSEYNRFVNQIATTAPLTGYAQPPQIGAVPMQPQYYPPN
GYQTGFPVVQQPAPQPAVQVPYVVSTPIGSPVPPLPGVVPTMAAPVPPVPAVPTRYPIPQ
VQPPGSTVPAQLTAPYMPAPHGKHAAAVVTQAPLQGQKRRFTEELPEERDSGLLGYQHGP
IHMTNLGTGFPAQSKVDGATIKSDTMVVKERERDRQLMPPPGMPVSAQKEPEEKSSPGTV
GVADDYPVKKLKSSGKTFGLVAYAGDSSDEEEDHGVLKSSGSLSQGWNAGYQYPASQQQQ
RAKPQMPFWMAP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgggaagcggacgaagaagcaaatgggaccagccaggcccccccagcaccaca
ctcctcctccccggcgtcctgcccgccattgtcccctttactgctggcgccttcctcagc
ccacccgaaatgccacctgtaactgccacatgtgagtccgtcagcgctccatctggggcc
ctggatgccgcagcagccgtggcagctaaaataaatgccatgcttatggccaaggggaag
ataaagccaacgcagaatgcccccgaaaaggttcaagtacccggcaaagcgccctctgca
gccaaaagcaaagatgacctggtagtggcagaagtggagatcaacgacgtacccctgacg
tgccggaatcttcttacaagggggcagacgcaggatgagataagtcgcatgagcggcgcg
gcggtatcgacacgggggcgctacatgactgcagaagagaaagccaaaatagggcctgga
gatcggcctctctatctgcatgtccagggccagacacgggaacttgttgatcgagccgtg
aacagaatcaaggaaatcatcaccaacggagtggtaaaagcagccaccggctccagcccg
acctttaacggagccacagtaaccgtgtatcaccagccggcccccgtggcgcccgttgct
cctcccaaacctcagttccagtcagggatgcattatgtacaagataagctgttcgtgggc
ctggaacacgcggtggccactttcaatgtgaaggagaaggtggaaggcccagggtgctcg
tatctccagcacattcagctggaaacgggggccaaggtcttcctacgaggcaaagggtcg
ggttgtattgagccagcctcggggagggaggccttcgagccaatgtatatttatatcagc
cacccaaagccagagggactagcggctgccaagaagctctgtgagaatctcttgcaaaca
gtccattcagaatacaataggtttgtcaaccagatcgccaccaccgcacctctgactggt
tacgcacagccgcctcagatcggtgcagtgcccatgcagccgcagtactaccctcctaat
ggctaccagactggctttcccgtggtccaacaacctgcaccccagccggctgtacaggtt
ccctatgtggtttctacacccattggcagcccagtgcccccactgcctggagttgtacct
accatggcagctccggtgcctccggttccagctgtgccaacccgttatccaatcccacag
gtgcagccgccaggttccactgttccagctcagctgactgctccgtatatgcctgcaccc
catggtaaacatgccgctgccgtagtgacacaggctccgctccaaggtcagaagcgacgc
ttcacggaagagcttccagaggagagggactccgggctgctgggttaccagcatggaccc
attcatatgactaatttaggtacaggcttcccggcccaaagcaaggtggatggagcgaca
atcaaatcggacaccatggtcgtcaaagagcgagagagggacaggcagttgatgcctccg
cccggtatgccagtctctgcacagaaggagccggaggaaaagtcatcacccgggaccgtt
ggggttgcagatgattatccagtaaaaaagctgaagagctcaggtaaaaccttcggcttg
gtcgcttacgccggggactcgtccgacgaggaggaagatcatggtgtgctaaagagctct
ggttctttatcccaaggctggaatgcaggataccagtacccagctagccagcagcagcag
cgcgccaagccacagatgccattctggatggcgccgtag
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