Xenopus tropicalis (tropical clawed frog): 780212
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Entry
780212 CDS
T01011
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
780212 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
780212 (uimc1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
780212 (uimc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
780212
NCBI-ProteinID:
NP_001072755
Xenbase:
XB-GENE-13579818
UniProt:
A0JM80
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Position
3:46423646..46447831
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AA seq
572 aa
AA seq
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MGCRGQNCSEKRRAIRDHFIVISDSEGEEEKEVIRFGKNIAQPDGRRTSVKRKIAQMTEE
EQLALAVRMSEQEANHVNYSQEEEDELLRKAIEESLHSCTVSEPCNTTTQQNTNTLHSTN
RTLAAEDCSEKHPISQNCSLSEPPNNITVQQVYKETLSTNEPVKLQEHAEEKSFSQVSAL
FELPSGAAEQQMNKEAHSTERPVVTGDVVEEGHLSQTFTVSETPLSATQEMNTEDFTTSA
TFVTEEVGEALTQYSTVSSQSRHKSPVVLLMRLSQDIVESSSVILSPKCRDPFSDMESGM
ASSCPSNSSNFVSMLPHKALTLSPVFPKQLPRRLGLSPRKLFQGASLTSDSKEQEVDDQC
SHCSESSELDYSVLPNSLQAEPFKSNTATEVLKENNTLLNGVTTEEQTGASNSCLDSQRQ
SGSTVHYYWGVPFCPKGEDPNLYTQVILCQLEVYEKSLKKAQRQLLRKMNFGEPVQLSAP
PLRRTERGKADSQDSLSQESEDLKDEDSPRPVDDEEVDSEKPMNQCVSSSSRQPAESLEE
ESPIPAQDEQDNNSQLILFLNMNNSHSTSLPL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcagaggccagaactgctctgagaagaggcgagccatccgggatcactttatt
gtcatctctgatagcgagggagaggaagaaaaggaggtgattagatttgggaaaaacata
gcccagccagatggaagaaggacatctgtaaagaggaaaatagcacagatgactgaggaa
gaacagctggcccttgcagtgaggatgagtgagcaggaagccaaccatgtaaattatagt
caagaagaagaggatgaactcttgagaaaggctattgaagaaagtctacatagctgcaca
gtttctgagccttgcaacacaaccacacagcaaaacaccaacaccttacattccactaat
agaacgcttgccgcagaagactgttctgaaaagcatcccatatcccagaactgttccctg
tctgaaccaccaaacaacataactgtacagcaggtatataaagagacactttccactaat
gaacctgttaaattgcaagaacatgctgaagagaagtccttttcccaggtatctgccctt
tttgagttacccagcggagctgcagagcaacagatgaacaaggaagcacattccacagaa
aggccagttgtcacaggagatgttgttgaagagggacatctttcccaaacctttacagtt
tctgaaactcccttgagcgcaacgcaagaaatgaacacggaggattttaccacttcagca
acttttgtcacagaagaggttggtgaggctctcacccagtattctacagtttctagtcaa
agtagacacaaaagtccagtagtgctgctgatgcgtctaagtcaggatattgtggaaagc
tctagtgtaatattgtcaccaaagtgtagagatcccttttcagatatggaaagtgggatg
gcatcatcttgtcctagtaacagcagtaactttgtttccatgttgcctcataaagcactt
acattaagccctgtctttcctaaacagctacctcgcaggctaggcttgtcgcctcgcaaa
ctctttcaaggtgctagcctgacttctgattcaaaggagcaggaagtagatgatcagtgt
tcacactgttcagagagttctgaactagattattctgtgttgcccaactcactccaggct
gaaccatttaagagcaacactgcaacagaagtgttgaaagaaaataatacattattgaat
ggggtcactacagaagagcagacaggagcaagtaatagctgtctggattctcagagacaa
agtggcagtactgtacactattattggggagtgccattttgcccaaaaggggaggaccca
aatctgtacactcaggtaatactttgtcaactagaagtgtatgagaagagcttgaagaaa
gctcagagacaacttttgcgaaagatgaattttggagaaccagtgcagctgtctgctcca
cctttacgtcgcaccgagaggggaaaagcggacagccaggacagtttaagccaagaatca
gaggatttaaaggatgaagattctcccaggccagtagatgatgaggaagtcgactctgag
aagcctatgaaccagtgtgtttcaagcagtagtaggcagccagcagaaagcttagaggaa
gaaagcccaattcctgcacaggatgagcaagataataactcacagcttatactttttctc
aatatgaataattctcattcaacaagcttaccgctgtag
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