Xenopus tropicalis (tropical clawed frog): 780314
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Entry
780314 CDS
T01011
Symbol
nr1h2
Name
(RefSeq) oxysterols receptor LXR-beta
KO
K08535
liver X receptor beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
780314 (nr1h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
780314 (nr1h2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xtr03310
]
780314 (nr1h2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
780314 (nr1h2)
Nuclear receptors [BR:
xtr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
780314 (nr1h2)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
780314
NCBI-ProteinID:
NP_001072853
Xenbase:
XB-GENE-482950
UniProt:
Q0IHW4
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Position
7:complement(117320779..117347104)
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AA seq
441 aa
AA seq
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MSATAVDGSDVSLDEDSFHSVDTVLLDSASSAKLQIKEERSESQGSSSLPNENEVPGTDG
EGSSQSAAEEPERKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKN
AQYTCKNNGKCQMDMYMRRKCQECRLRKCREAGMREQCVLSEEQIRSKKIKKQQEDDVTR
PSSALVPPSPCMLSQEVVQLTPQQEKMIQQLVSAQQQCNKRSFSDQPKVTPWPLGSDPNS
REARQQRFAHFTELAIISVQEIVDFAKQIPGFLELSREDQIALLKASTIEIMLLETARRY
NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRGMRQMQLDDAEYALLIAINIFS
ADRPNVQNHQLVENLQLPYVEALHSYTRIKRPQDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccacggctgtcgatggctctgatgtttctcttgatgaggattccttccactct
gtggatacagtgctgctggattcggctagctcagcaaagctgcagataaaagaagagcgg
tcggaatctcaaggaagttcctccctgccaaatgagaatgaggtgccgggaactgatgga
gagggctcctcccagagtgctgcagaggagccagagcggaaacggaaaaagggtcctgct
ccaaagatgctggggaatgaagtttgcagcgtgtgcggggacaaggcttcaggctttcat
tacaacgtgctgagctgcgagggctgcaagggctttttccgacgcagcgtcataaagaac
gcgcagtacacgtgcaagaacaatggcaagtgccagatggacatgtacatgcgacggaag
tgccaggagtgtcggctccgcaagtgcagagaggcaggaatgcgagagcagtgtgtcctt
tctgaagagcagattcgcagcaagaagattaagaaacaacaagaggacgatgtaactcga
ccttcatctgccttggtgccgccaagcccctgcatgctttcccaggaagtggttcagcta
acgccacagcaggaaaagatgatccagcagctggtatctgcgcagcagcagtgcaacaaa
cgctctttcagcgatcagcccaaagtaacgccatggccacttggaagtgacccaaacagc
agagaggcccgacagcagagatttgcccactttacagagttagcaatcatttctgtgcag
gagattgttgactttgccaaacaaatacctggcttcctagaactgtcacgagaggatcag
atagcgctactgaaggcatcaacaatagagattatgctgctggaaacagccaggcgttac
aatcatgagacagaatgtatcacctttctcaaggatttcacatacagcaaagatgatttt
cacagagcaggattgcaggtggagttcataaatcccattttcgagttctctcgtggaatg
aggcagatgcagctggacgacgcagagtacgcccttctcatagccatcaacatcttctct
gcagaccgaccaaatgttcagaatcaccagctggtggaaaacctgcagctgccatacgtg
gaagccttgcactcctacacccggattaaacggcctcaggaccacctgatgtttccacgt
atgttgatgaagctggtcagcctgcggacacttagtagtgtgcactctgagcaagttttt
gctctccgccttcaggataaaaaactgcccccattactttccgaaatctgggacgttcac
gagtag
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