Xenopus tropicalis (tropical clawed frog): 780341
Help
Entry
780341 CDS
T01011
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
780341 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
780341 (usp19)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
780341 (usp19)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
780341 (usp19)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
780341 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
780341
NCBI-ProteinID:
NP_001072879
Xenbase:
XB-GENE-5869969
UniProt:
A0JLZ0
LinkDB
All DBs
Position
4:complement(137445656..137502566)
Genome browser
AA seq
1435 aa
AA seq
DB search
MSHPAEGANQRRVTRGTADAINRKKQKDKANQESKEGKAPTNAGPQKDIVIDWKQNSEEV
IVKLNAGSRALNVEELNAEFTDTDCVISFPEGQQWKCQFHEEIEGSCSKIQYKEKGNILQ
IILQKKIPFNKWPTLQKKKKESMKEQVKAGALMENGKPKVSLKLPLPDKSQTQPSESTDA
RKGKPDHRSVRRGQETTEASSGVKSSLTRKSISTAVHSGVQMKRGCHKSASVIAGGDSSP
QSQKVAGSEDLSSRGLNKRNVQIPSGNATWAGHKSGDSQAELQNAQRDQNKSLGKEKMPA
LDQQVLLQEAGPTLQPACLHAVEKQNAPIDLNSVIVAPCKEMLASTSEQTLDCQQELSKM
NLNLEVKEVVVKPHSDSALSDATELGGPPKKVDSPTEDCLEDTTEEPEPIVNLTFVKNDH
YEKGNDVVVVHVYVKEICKETSRVLFREQDFTLIFKTRDPNFLRLHPNCTPDTVFRWQVK
LRNLIEPDLCRYCFTGARVDISLQKKQCQRWGGLEAPATQGAVGGAKVAMPAGPPPHDKT
QPGSNQHSLSNKEEARAVEKEKPRAEDTGLDKVSSRTPTDHVSVKSEQLLSSPKPTCMVP
PMTHSAVSSENVQEEEEKRVCPPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFQDRSFE
SEINCNNPLGTGGRLAVSFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQE
FMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEEVADEAWLRHKMRNDSFVVDLFQGQYK
SKLVCPVCAKVSITFDPFLYLPVPLPQKQKVLTVYYFAREPHKKPIKFLVSISKENSSAA
EVLESISKSVRVKAENLQLAEVVKNRFQRIFRPSCSLDSVSPNDLLFCFEVLSKELSKER
VVVFQVQQRPQVPSIPITKCAACQKKQMSEEEKLKRCTRCYRVGYCNQVCQKSHWPDHKT
ACRPENIGYPFLISVPESRLTYSRLAQLLEGYARYSVNVFQPPFIPGRTSPDHAPQPLSS
EKADLPPQSDLPLLGESSEEEKDFHSVQSSQTTLPPLTCLSASGDSGIVHGKPPGDRVSL
YSTDSGFSEHSTDTVREMDSGGEKETIYEKSVKPEAAVAGFQQSESVNVHASAFYINVID
PNNKEMKLEDKGESPLELTEDCSLALVWKNNERAKEFVLVESKELECEEDPGSASEAARA
GLFTLDQCLNLFTKPEVLAPEEAWYCPKCNQHREASKQLMLWRLPNILIIQLKRFSFRTF
IWRDKINDMVDFPVRNLDLSTFCIGQKEDHQRPIYDLYAVINHYGGMIGGHYTAYARLPN
EKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVERPMRGHPADRRVDAG
ASADVAGSQGVSQMAYGPSMNSQDTSAMASDTDADLFPHPTDPTPSSYSNMEDVD
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcctgccgagggtgccaatcagagaagggtgactcggggcacggcagatgca
attaatagaaagaaacagaaagataaagccaaccaggaaagcaaagagggcaaggcaccg
acaaatgcaggcccccaaaaagacattgtgattgactggaagcagaattcagaagaagtc
atcgtgaaattaaatgctggatcaagagctttaaatgtggaagagctgaatgctgaattc
acagatacagattgtgttattagcttcccagaaggccagcaatggaaatgccaatttcat
gaggaaattgaaggttcttgcagtaaaattcaatataaagaaaaaggcaatatcttgcaa
atcatccttcagaagaaaattccatttaacaaatggccaacacttcagaagaaaaagaaa
gagtccatgaaagagcaagtaaaagctggtgcccttatggaaaatgggaaacctaaagtg
tctttaaaattaccactacctgacaaatcccagacccaaccatccgagagcacagatgca
cgaaagggtaaaccagaccataggagtgtgagaagaggacaagaaacaacagaggctagc
agtggagtgaagagcagccttacaaggaaatccatatctactgcagtgcacagtggagtc
cagatgaaaagaggctgccataaatctgcctctgtgatcgcaggaggggattccagtcca
cagagtcagaaagttgcaggctctgaggacctttccagcagaggactaaataaacggaat
gtccaaatcccttctggaaatgcaacttgggcaggacacaagtctggagacagccaagca
gagctgcagaatgcacaaagggaccagaataaaagtttagggaaggagaaaatgcctgcg
ctggatcaacaggtactgctccaagaggcgggaccaaccttgcaacctgcatgtttacac
gctgtggagaagcagaatgcaccaattgacctgaattcagttattgtggctccatgcaaa
gaaatgctcgcatccacgtctgagcaaaccctggactgtcagcaggagctgtctaaaatg
aacctaaacttggaagtaaaggaagttgtagtcaagcctcactcggatagtgcactctca
gacgctacagaattaggtggccctcccaaaaaagtggattcccctactgaggattgtcta
gaagatacaacagaagagccagagccaatcgtgaatctcacctttgtcaaaaacgatcac
tatgagaagggtaatgacgtggttgtcgtacacgtgtatgtgaaggagatctgcaaagaa
acttctagagtgctattccgggaacaagattttacactcatcttcaaaacaagggatcca
aattttttgcgacttcatccaaactgcacgccagatactgtgttcaggtggcaagtaaaa
ctcagaaatcttattgagccagatttgtgccgttactgtttcaccggcgctcgtgtcgat
atttccctgcagaagaagcaatgccagaggtggggtggcttagaggcaccagccacacaa
ggtgcagtgggtggtgccaaggttgcaatgcctgctggtccacctccccatgataaaact
cagcctggaagtaatcagcattctctgtccaacaaagaggaggccagagcagtggagaaa
gagaagccaagagcagaggacaccggcctggacaaggtcagctctaggacaccaactgat
catgtctccgtcaaatcagagcagcttctgtcttcgcccaagccaacatgcatggtccca
ccaatgacgcacagtgccgtgagcagcgaaaatgtacaagaagaagaagagaaaagagtc
tgcccaccaggttttactggtctggtcaacctgggtaacacctgcttcatgaacagtgtt
atacaatccctgtccaacacccgggagctcagagactactttcaagatcgttctttcgaa
tcagagattaactgcaataaccctcttggaactggtggccggcttgcagttagctttgct
gttcttttacgggcgctttggaaaggaacacatcatgcttttcagccatctaagctcaaa
gcaatagtagccagcaaggcaagtcagttcacaggctacgcccagcatgatgcacaggag
ttcatggcttttctgttggatgggcttcatgaggatctcaacaggatacagaacaagccg
tacacggagacagttgattcagatggaaggccggatgaggaggtggcagatgaagcctgg
ctacggcataaaatgaggaatgattcctttgtggtggatttattccagggccagtacaag
tctaagctggtgtgtcctgtctgtgcaaaggtttccatcacatttgaccccttcctgtat
ctcccagttcccttgccccagaagcagaaggttctcactgtgtattactttgccagggag
cctcacaagaagcctattaagtttttggtgagcataagcaaggagaattcttctgctgct
gaggtcctggagtccatctctaagagtgtgcgagtcaaggctgaaaatctacagttggcg
gaggtggtaaaaaaccgttttcagcgtatcttcaggccatcttgctctctggattctgtc
tcccccaacgacctgctcttctgttttgaggttctctccaaggaactctctaaggagcgt
gtggttgtgtttcaggtccagcagcgcccccaagtgcccagtattcccataactaaatgc
gctgcttgccagaagaaacagatgtctgaggaggaaaagctgaagcgatgtacaaggtgt
tatagagtcggatattgcaaccaagtctgccagaaatcacattggcctgatcataagact
gcctgccgaccagagaacataggctaccccttcctcatcagtgtccctgagtcacgactg
acttactcccgtctggcgcagctactggagggttatgccagatactctgtaaatgtgttc
cagcctccatttattccggggaggacatcaccagatcacgcacctcaaccactaagttca
gagaaggcagatcttcctccacagtcagatcttccccttttaggggagtccagcgaggag
gagaaagattttcactctgtgcagtcttctcaaaccactctgcctcctctcacctgtctc
tccgcctcaggagactctggtattgtgcatggcaagccacccggggatagggtctctctg
tacagcacagactctggcttttctgaacacagcacagacacagttagggagatggattct
ggaggcgagaaagaaaccatttatgagaaatcggttaaacctgaagctgctgtcgccggt
ttccaacaatcggagtctgtgaacgtgcatgcttctgctttctacatcaatgttattgac
ccaaataacaaagagatgaagctggaagataaaggggagtctcctttggagctgacagaa
gactgctccctggcacttgtgtggaagaataatgagcgggcaaaggagtttgttcttgta
gagtccaaggaactagagtgtgaggaggatcctggatctgctagtgaagcagccagagcc
ggtctcttcactttggatcagtgtctcaacctctttactaagccagaagtcctagcaccg
gaggaagcctggtactgccccaagtgtaaccagcacagagaagcatccaagcagctgatg
ctctggcggctgccaaacatcttaatcatccagctgaagcgattctccttccggacgttt
atctggagggacaaaatcaacgatatggtggactttcctgtcaggaatctagacttgagc
actttctgtattggccaaaaggaagaccaccagaggcctatatatgacctttatgcagtc
ataaaccattatgggggaatgattggtggacactacacggcatatgccagactacccaat
gagaagaacagccagcgcagtgacgtgggttggagactgttcgatgacagcacagtgacg
acagtggatgaaagccaagtagtgacaaggtacgcttatgtacttttctaccggcggagg
aattccccagtggagaggccgatgcgggggcacccagcagaccggcgagtggacgcaggg
gcatcagcagatgtggcaggaagccagggagtgagccaaatggcatatgggcccagtatg
aactctcaggatacctcggccatggcctccgacaccgacgccgacctgttccctcacccc
acggatcccaccccatcatcctacagcaacatggaagacgtggattag
DBGET
integrated database retrieval system
