Xanthomonas tesorieronis: AB3X08_01060
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Entry
AB3X08_01060 CDS
T10866
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xts Xanthomonas tesorieronis
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xts03032
]
AB3X08_01060
03400 DNA repair and recombination proteins [BR:
xts03400
]
AB3X08_01060
Enzymes [BR:
xts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3X08_01060
DNA replication proteins [BR:
xts03032
]
Prokaryotic type
DNA Topoisomerases
AB3X08_01060
DNA repair and recombination proteins [BR:
xts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3X08_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
GHL6
Motif
Other DBs
NCBI-ProteinID:
XEB00053
LinkDB
All DBs
Position
238923..240143
Genome browser
AA seq
406 aa
AA seq
DB search
MSNASRTTAATEAARALQARQAASSAGLVYVSDEEPGIARRRAGKGFSYRLPDGRPVRDA
QTLQRIRQLAIPPAYTEVWICAKPNGHVQATGRDARRRKQYRYHPDWAQVRGDGKFERIM
AFGQALPRLRRRLRRDLALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLEFVKGGRARLKFRGKGGQEHDIEVDDVRLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGESFTAKDFRTWGGTRAALQRLAQLPLPDPSSERALKLAQNAVIRE
VADALGNTPAVCRKAYIDPCVFDGWRGGELHGLCERVRGERQWDLATLNYLARARAATRK
AVKAVKAKRTKKTGSTAAGAKPTQSARPRRAGSPAAGSAARSRRRA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgcaccaccgccgccaccgaggcggcccgcgcgctgcaggccaga
caggccgccagcagtgccggcctggtctatgtcagcgacgaagagcccggcatcgcccgc
cgccgcgccggcaagggcttcagctaccggttgccggatggccgcccggtgcgcgatgcg
cagaccttgcaacgcatccgccagctggcgatcccgccggcctacaccgaggtgtggatc
tgcgccaagcccaacggccacgtgcaggccaccggccgcgacgcgcggcggcgcaagcag
taccgctatcaccccgactgggcgcaggtgcgcggcgacggcaagttcgaacggatcatg
gccttcggccaggccttgccgcggctgcgccggcgcctgcgccgcgatctggcgctgccc
ggctatccgcgcgacaaggtgctggcgatggtggtggcgctgatggccgagaccctggtg
cgcgtgggcaatgccgaatacgcgcgcagcaaccgctcctacggcctgaccacgctgcgc
aaccgccacctggaattcgtcaagggcggccgcgcgcggctgaaattccgcggcaagggc
gggcaggagcacgacatcgaggtcgacgacgtgcgcctggtcaaactgattcgcggctgc
cagcaattgcccgggcaggcgctgttccagtaccgcgacgacgacggccaactgcagccg
gtggactcgggcgaggtcaacgactacctgcgcgaggcgatgggcgagagcttcaccgcc
aaggacttccgcacctggggcggcacccgcgccgcgctgcagcggctggcgcagctgccc
ttgcccgaccccagcagcgaacgcgcgctgaagctggcgcagaacgcggtgatccgcgag
gtggccgatgcgctgggcaatacgccggcggtgtgccgcaaggcctatatcgacccgtgc
gtgttcgacggctggcgcggcggcgaactgcacggcctgtgcgagcgcgtgcgcggcgag
cggcagtgggacctggccacgctgaactacctggcgcgggcgcgtgctgcgacccgcaag
gcggtcaaggcggtcaaggccaagcgcaccaagaagacggggtccacggcggcgggcgcc
aagccgacgcaatccgcccggccgcgtcgggccggcagcccggcggccggaagcgctgcg
cgctcacgccgtcgcgcctga
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