Xanthomonas tesorieronis: AB3X08_02950
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Entry
AB3X08_02950 CDS
T10866
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xts Xanthomonas tesorieronis
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xts03032
]
AB3X08_02950
03400 DNA repair and recombination proteins [BR:
xts03400
]
AB3X08_02950
Enzymes [BR:
xts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3X08_02950
DNA replication proteins [BR:
xts03032
]
Prokaryotic type
DNA Topoisomerases
AB3X08_02950
DNA repair and recombination proteins [BR:
xts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3X08_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PGM_PMM_IV
Toprim_2
HeLo
Motif
Other DBs
NCBI-ProteinID:
XEB00397
LinkDB
All DBs
Position
complement(658692..661202)
Genome browser
AA seq
836 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIDKN
EKHVEAIAKAAKAADDIYLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMANPRQIAVDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIGAECAHPSQPFAAKLVKLDGQKFEQFTITDGATAEDARMRLQK
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTSRTMRVAQKLYEGVTLGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDFGTGALPDKPNMYQTKSKNAQEAHEAIRP
TSALRTPAQMAKYLDDDGRRLYELIWKRAVACQMVPATMNTVTVELAAGNEHSFRASGTT
VIDPGFLAVYEEGKDQKAAEDEDEGRKLPPMKPGDRIPLDRIHADQHFTEPPPRYSEASL
VKTLEEYGIGRPSTYASIIQTLLFRKYVELDARRFRPSDVGRAVSKFLSGHFTRYVDYDF
TAKLEDELDAVSRGEEEWRPLMEKFWGPFKELVEEKKESVDRSEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEDALELFLMPRALGEDKGE
DVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEYEGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLTLEEVQKLLEETGKPARRGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTAKKTAKKAAKKAVKKVVKKAAAKPA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaaa
gagggcgcggtggacccggacgacggcttcgcgatgcgctacgcgctgatcgacaagaac
gagaaacacgtcgaagccatcgccaaggccgccaaggccgccgacgatatctatctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaggag
cgcgggctgctcaaggacaaaccgctgcaccgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaagcgatggccaacccgcgccagatcgccgtggacctggtcgatgcgcag
caggcgcggcgcgcgctggactacctggtcggcttcaacttgtcgccggtactgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtg
gagcgcgaggaggagatcgaagccttcgtcgcccgcgaatactggagcatcggcgccgag
tgcgcccacccctcgcagccgttcgcggccaagctggtcaagctcgacgggcagaagttc
gagcagttcaccatcaccgacggcgccaccgccgaagacgcgcggatgcgcctgcagaag
gctgcgcagggcgcgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccaccgttcaccacctccacgctgcagcaggaggcctcgcgcaagctcggcttcacc
accagccgcaccatgcgcgtggcgcagaagctgtacgaaggcgtgaccctgggcgacgaa
ggcacggtcggcctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcgcgcgacttcggcaccggcgcgctgccggacaag
ccgaacatgtaccagaccaagtccaagaacgcgcaggaagcgcacgaggcgatccgcccg
accagcgcgctgcgcaccccggcgcagatggccaagtatctggacgacgatggccgccgc
ctgtacgaactgatctggaagcgcgcggtggcgtgccagatggtgccggcgacgatgaac
accgtcaccgtggaactggccgccggcaacgaacacagcttccgcgccagcggcaccacg
gtgatcgatccgggctttctggccgtgtacgaggaaggcaaggaccagaaggccgccgag
gacgaggacgagggccgcaagctgccgccgatgaagcccggcgaccgcatcccgctcgac
cgcatccatgccgaccagcatttcaccgagccgccgccgcgctactcggaagcctcgctg
gtcaagacgctggaggaatacggcatcggccgtccgtcgacctatgcctccatcatccag
accctgctgttccgcaagtacgtggaactggacgcgcgccgcttccgtccctctgacgtg
ggccgcgcggtcagcaaattcctgtccggccacttcacccgctacgtcgattacgacttc
accgccaagctcgaggacgagctggatgcggtgtcgcgcggcgaggaggaatggcggccg
ttgatggagaagttctggggcccgttcaaggaactggtcgaggagaagaaggaatcggtg
gaccgctccgaggccaccggcgcgcgcgaactcggcaccgaccccaagaccggcaagccg
gtcagcgtgcgcctgggccggttcgggccgtacgcggcgatcggcagcaccgccgaggat
gccgaggacaagcccaagttcgcctcgctgcggccgggccagagcatgcacaccatcacc
ctggaagacgcgctggagctgttcctgatgccgcgcgccctgggcgaggacaagggcgag
gacgtcagcgtcggcatcggccgtttcgggccgttcgccaagcgcggcagcgtctacgcc
tcgctgaagaaggaagatgatccgtacaccatcgacctggcgcgcgcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccgcatcatcaaggaatacgaaggcagcgacatc
caggtactcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggaccgcgagccggccacgctgaccctggaagaagtgcagaagctgctggaagaa
accggcaagccggcacggcgcggcttcggcgcgaagaaggccgcggcgaagaaggaagcg
gcgccgaagaagagcgcagccaagaaggccgcggccgacgccccggccaagcccgcggcg
aagaaggcggtcaagaaagccgcgaagaagaccgcgaagaagaccgcgaagaaagcggcc
aagaaggcggtaaagaaggtggtcaagaaggccgcggccaagcccgcctga
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