Xanthomonas tesorieronis: AB3X08_03645
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Entry
AB3X08_03645 CDS
T10866
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xts Xanthomonas tesorieronis
Pathway
xts00300
Lysine biosynthesis
xts00470
D-Amino acid metabolism
xts01100
Metabolic pathways
xts01110
Biosynthesis of secondary metabolites
xts01120
Microbial metabolism in diverse environments
xts01230
Biosynthesis of amino acids
Module
xts_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3X08_03645 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB3X08_03645 (dapF)
Enzymes [BR:
xts01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB3X08_03645 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XEB00520
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Position
833769..834623
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AA seq
284 aa
AA seq
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MSEASVAARLRFSKMQGAGNDFVVLDLRDGTPPPDAALAVRLADRHFGVGCDQLLTIEAP
RSADAVASYRIWNTDGSLAGQCGNGARCVAAWLVRDGAAGNDPFVIDSPFASHRIERNAD
GQFAVAMGVPRFAPENVPLIGFPRMREEYVLPLQGGSVRFGAVSMGNPHAVLEVGLVDAA
PVERLGPLLQQHASFPDSVNVGFAQVIDRGHVRLRVYERGVGETLACGSGACAAAAVLIQ
RGRVDRDVRVVLPGGELRIHWPHDDAPVVMSGPAAFVFDGEWIR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggccagcgtcgcggcgcgcctgcgcttttccaagatgcagggcgcgggcaac
gatttcgtggtgctcgatctgcgcgacggcaccccgccgccggacgccgcgctggcggtg
cgcctggccgaccgccatttcggcgtcggctgcgaccaactgctgaccatcgaggcgccg
cgcagcgccgacgcggtggccagctaccgcatctggaataccgacggcagcctggccggg
cagtgcggcaacggtgcgcgctgcgtcgccgcctggctggtgcgcgacggcgccgccggc
aacgatccgttcgtcatcgacagtccgttcgcctcgcaccgcatcgaacgcaacgccgac
ggccagttcgcggtggcgatgggcgtgccgcgcttcgccccggagaacgtgccgctgatc
ggcttcccgcgcatgcgcgaggaatatgtgctgccgctgcagggcggcagcgtgcgcttc
ggcgcggtgtcgatgggcaatccgcatgcggtgctggaagtgggcctggtcgatgccgcc
ccggtcgagcggctggggccgctcctgcagcagcacgcgtcgtttcccgattcggtcaac
gtcggcttcgcccaggtgatcgaccgcggccatgtgcgcctgcgcgtgtacgagcgcggc
gtcggcgagaccctggcctgcggcagcggcgcctgcgcggccgcggcggtgctgatccag
cgcggccgcgtggaccgcgacgtgcgcgtggtgctgcctggcggcgaactgcggatccac
tggccgcacgacgatgcgccggtggtgatgtccgggccggccgcattcgttttcgatggg
gagtggatccgatga
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