Xanthomonas tesorieronis: AB3X08_06245
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Entry
AB3X08_06245 CDS
T10866
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xts Xanthomonas tesorieronis
Pathway
xts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3X08_06245 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xts03019
]
AB3X08_06245 (recQ)
03400 DNA repair and recombination proteins [BR:
xts03400
]
AB3X08_06245 (recQ)
Enzymes [BR:
xts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3X08_06245 (recQ)
Messenger RNA biogenesis [BR:
xts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3X08_06245 (recQ)
DNA repair and recombination proteins [BR:
xts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3X08_06245 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
XEB01005
LinkDB
All DBs
Position
complement(1462427..1464235)
Genome browser
AA seq
602 aa
AA seq
DB search
MQSSAHSVLSRVFGYDQFRGPQQDIVEHVAAGQDALVLMPTGGGKSLCYQIPSLLRDGTG
IVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAQRVERELLAGELDLLYVAPERLLT
PRFLSLLERSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPPT
QREIAERLDLTQARHFVSSFDRPNIRYTVVQKDNSKRQLLDFLRAHRGSAGIVYCMSRRK
VEETAEFLAREGLNALPYHAGLPAELRAANQRRFLREDGIVMCATIAFGMGIDKPDVRFV
AHTDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQGEAGEDRKRVERRK
LDQLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLSPAAAWDATVAVQKALSCVYRSG
QRFGVGHLIDILRGSDGEKIKQFGHDQLSTYGIGKDLDARTWRGVFRQLVATGLLEVDSD
AYGGLRLTDASRQVLKGERQIMMRREAPSRGRERGDRSGSPRTGVPVQPQDLNLFNALRD
LRAGLAKEQNVPAFVIFHDSTLRNIAEQRPTSLDELGHVGGIGGTKLARYGQQLIDIVLQ
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttccgcccattccgtgctcagccgcgtgttcggctacgaccagttccgcggt
ccgcagcaggacatcgtcgaacatgtcgccgccggccaggacgcgctggtgctgatgccc
accggcggcggcaagtcgctgtgctaccagatcccctcgctgctgcgcgacggcaccggc
atcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgaggcgcttcgccagctc
ggagtgcgcgccgaatacctcaattccacgctggacgccgagaccgcgcagcgggtcgag
cgcgagctgctggccggcgagctggacctgctgtacgtcgcccccgaacgcctgctgacc
ccgcgcttcctgtccctgctcgaacgcagccgcatcgccctgttcgcgatcgacgaggcg
cactgcgtgtcgcaatggggccacgatttccgccccgagtaccggcagctcaccgtactg
cacgagcgctggccgcagatcccgcgcatcgccctgaccgccaccgccgatccgccgacc
cagcgcgagatcgccgaacgcctggacctgacccaggcgcgccacttcgtcagctccttc
gaccgccccaacatccgctacaccgtggtgcaaaaggacaacagcaagcgccagctgctg
gatttcctgcgcgcgcatcgcggcagcgccggcatcgtctactgcatgtcgcggcgcaag
gtcgaggagaccgccgagttcctggccagggaagggctcaatgccctgccctaccacgcc
ggcctgccggccgagctgcgcgccgccaaccagcgccgtttcctgcgcgaggacggcatc
gtgatgtgcgccaccatcgccttcggcatgggcatcgacaagccggatgtgcgcttcgtc
gcgcataccgacctgcccaagtcgctggaaggctactaccaggaaaccggccgcgccggc
cgcgacggcgaagccgccgaggcctggctgtgctatggcctgggcgatgtggtgctgctc
aagcagatgatcgaacagggcgaggccggcgaggaccgcaagcgggtggagcggcgcaag
ctcgaccagctgctgggctattgcgaatcgatgcaatgccgccgccaggtgctgctggcc
ggcttcggcgaaacctatccgcagccctgcggcaactgcgacaactgcctgagcccggcc
gcggcctgggacgccaccgtcgccgtgcagaaggcgctgagctgcgtctaccgcagcggc
cagcgcttcggcgtcggccacctgatcgacatcctgcgcggcagcgacggcgagaagatc
aagcagttcggccacgaccagctcagcacctacggcatcggcaaggacctggacgcgcgc
acctggcgcggcgtgttccgccagctggtcgccaccgggctgctggaagtggacagcgac
gcctacggcgggctgcgcctgaccgacgccagccgacaggtgctcaagggcgagcgccag
atcatgatgcgccgcgaagcgccgagccgcggccgcgaacgcggcgaccgcagcggcagc
ccgcgcaccggcgtcccggtgcagccgcaggacctgaacctgttcaacgcgctgcgcgac
ctgcgcgccggcctggccaaggagcagaacgtcccggcgttcgtgatcttccacgacagc
accctgcgcaatatcgccgaacagcgccccaccagcctggacgagctgggccatgtcggc
ggcatcggcggcaccaaactggcccgctacggccagcagctgatcgatatcgtgctgcag
caaggctag
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integrated database retrieval system
