Xanthomonas tesorieronis: AB3X08_08155
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Entry
AB3X08_08155 CDS
T10866
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xts Xanthomonas tesorieronis
Pathway
xts03030
DNA replication
xts03430
Mismatch repair
xts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3X08_08155 (dnaE)
03430 Mismatch repair
AB3X08_08155 (dnaE)
03440 Homologous recombination
AB3X08_08155 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xts03032
]
AB3X08_08155 (dnaE)
03400 DNA repair and recombination proteins [BR:
xts03400
]
AB3X08_08155 (dnaE)
Enzymes [BR:
xts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3X08_08155 (dnaE)
DNA replication proteins [BR:
xts03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3X08_08155 (dnaE)
DNA repair and recombination proteins [BR:
xts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3X08_08155 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XEB01364
LinkDB
All DBs
Position
complement(1927315..1930908)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSTSRFAHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELELPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADSPGETPWRLTVLCRNRDGYLSLSRLLTRAWLE
GHRNEGGVAIRPEWLQTGSDNLFALAGRDSLAGRLASEGRHDLAEQQLADWQRIFGDGLH
LELTRTGRDGEEAFNQFALHAAGMRGLPVIASNDVRFLYASDFAAHEARVCISSGRVLDD
PKRPRDYSDQQYLKSSQEMAALFADIPDAIDNTLALAQRCNIEMQLGTYFLPAYPVPDNE
TLDSWIRSQSRDGLAARLEKNPLAPGKTRQDYADRLEFELDTIIKMGFPGYFLIVADFIQ
WGKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMD
RRDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGI
TLKDAMGEGKDSEMASPELIQRYQSEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPL
SDFCPLFAEHDVDNLGKNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHAR
AGIPPVDITAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDAKPDRFEDLIALVSL
YRPGPMDLIPDFNARKHGQQEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGAYSLGG
ADLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAY
ALVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRINASAYMFA
AATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEALIN
AGAMDGLGSNRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALRLDLPESKEW
PLGQLLTGERETLGFYLSGHPFDPYREEVRELVGCDLSALEKICAQSGGGRGGGGDGEKR
AWRPETSAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFTDAIAEFGHLLTRDRILIV
KGGVREDEFNGGYAMRIRQCWDYEQICTHYAQRLSLRLDLRQRSTWPRIDALLARHRPGK
TPLRLDLLLQSEQGAVAGMLDLNGSHSVRVDPQLLDTLRADPGVRAVKVKYNPPWAT
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgctcatctgcacgtccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggccgacccgaagaaggccaagcaggccaac
ctgctcagccgtgcggtcgaactggaattgcccgcgctcgcggtcaccgacctgaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacctgctgatcgccgacagccccggcgagacgccgtggcggctcaccgtgctg
tgccgcaaccgcgacggctacctgagcctgtcgcggctgctgacccgcgcctggctggaa
ggccaccgcaacgaaggcggcgtggcgatccgcccggagtggctgcagaccggcagcgac
aatctgttcgcgctggccgggcgtgacagcctggccgggcgcctggccagcgaaggccgc
cacgatctggccgagcagcaactggccgactggcaacgcatcttcggcgacggcctgcac
ctggaactgacccgcaccggccgcgacggcgaggaagcgttcaaccagttcgcgctgcac
gccgccggcatgcgcgggctgccggtgatcgccagcaacgacgtgcgcttcctgtacgcc
agcgacttcgccgcgcacgaagcgcgcgtgtgcatctcctccggccgcgtgctcgacgat
cccaagcgcccgcgcgactacagcgaccagcaatacctgaagtcgtcgcaggaaatggcc
gcgctgttcgccgacattcccgacgccatcgacaacacgctggcgctggcgcagcgctgc
aacatcgagatgcaactgggcacctacttcctgcccgcgtatccggtgcccgacaacgag
acgctggacagctggatccgcagccaatcgcgcgacggcctggccgcgcgcctggagaag
aatccgctggcgccgggcaagacccgccaagactacgccgaccggctcgagttcgagctg
gacaccatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccag
tggggcaagaaccagggcattccgatcggcccgggccgcggttccggcgccggctcgctg
gtggcctgggcgctgcagatcaccgacctggatccgctgccgtacaacctgctgttcgag
cgcttcctcaaccccgaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggac
cgccgcgacgaggtcatcgactacgtcgcgcgcaagtacggccgcgaccgggtcagccag
atcatcacctacggcaccatggcggccaaggcggtggtacgcgactgcggccgcgtgctc
ggcttcccgtacggcctggtcgacggcgtggccaagctgattcccaacatcctcggcatc
acgctgaaggacgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatc
cagcgctaccagagcgaggacgacgtccgcgacctgatggacctggcgcggcagctggag
gacctgacacgcaacgccggcaagcacgccggcggcgtggtcatcgcaccgacgccgctg
tcggacttctgcccgctgttcgccgaacacgacgtcgacaacctgggcaagaacccggtc
acccagttcgacaaggacgacgtcgagcaggtcggcctggtcaagttcgacttcctcggc
ctgcgcacgctgaccatcatcgactgggcggtgaaggcgatcaacgtgcgccatgcgcgc
gccggcatcccgccggtggacatcaccgcgatcccgctggacgacgcgcccacctacaag
ggcatcttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgc
cggctgctgaaggacgccaagccagaccgcttcgaagacctgatcgcgctggtgtcgctg
taccgccccggcccaatggacctgatcccggacttcaacgcgcgcaagcacggccagcag
gagatcgtctaccccgatccgcgcaccgaagcgatcctgaaagacacctacggcatcatg
gtgtaccaggagcaggtgatgcagatggcgcagatcgtcggcgcctactcgctgggcggc
gccgacctgttgcgccgcgcgatgggcaagaaggtgccggccgagatggccaagcaccgc
gagatcttccgcgagggcgcggccaagggcggcgtcggcgaagccaaggccgacgaaatc
ttcgacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctac
gcgctggtcagctaccagaccgcgtggctgaagcggcactatccggccgagttcatggcc
gcgacgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtg
cgcaacctcggcctgaccgtgctgccgccgcgcatcaacgcctcggcctacatgttcgcc
gcggccaccccggacaccatccagtacggcctgggcgcgatcaagggcgtgggccgcggc
gcctgcgaggcgatcgtggccgagcgcgagcgcggcggcgaatacgcctcgctgctggat
ttctgcacccgcgtggaatcggccaagctcaacaagcgcaccctggaagcgctgatcaac
gccggcgcgatggacgggctgggcagcaaccgcgccacgctgatgctgcagctgccggag
gtgatgaaggccaccgaacagatggcgcgcgagcgcgcctccgggcagaactcgctgttc
ggcggcgccgacaccagcgccccggcgctgcgcctggacctgccggaaagcaaggaatgg
ccgctgggccagctgctgaccggggagcgcgagacgctgggcttctacctcagcggccac
ccgttcgatccctaccgcgaggaagtgcgcgagctggtcggctgcgacctgagcgcgttg
gaaaagatctgcgcgcaatccggcggcggacgcggtggtggcggcgacggcgaaaaacgc
gcctggcgcccggaaaccagcgcgatcctcgccggccaggtggtcggggtgcggcgcaag
ggcgacagccaggtgttcgtgcagctcgaggacggccgcggccgggtcgagtgcagcgcg
ttcaccgacgccatcgccgagttcggccacctgctcacccgcgaccgcatcctgatcgtc
aagggcggcgtgcgcgaggacgaattcaacggcggctatgcgatgcgcatccgccagtgc
tgggactacgagcagatctgcacccactacgcgcagcgcctgtcgttgcgcctggacctg
cgccagcgcagcacctggccgcgcatcgacgccctgctggcgcgccaccgccccggcaag
accccgctgcgcctggacctgctgctgcaatccgaacaaggcgccgtcgccggcatgctc
gacctcaacggcagccattcggtgcgcgtggacccgcagctgttggatacgctgcgcgcc
gatccgggggtgcgcgcggtgaaggtcaagtacaacccgccgtgggcgacctga
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