Xanthomonas tesorieronis: AB3X08_13965
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Entry
AB3X08_13965 CDS
T10866
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xts Xanthomonas tesorieronis
Pathway
xts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3X08_13965 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xts03019
]
AB3X08_13965 (pnp)
03016 Transfer RNA biogenesis [BR:
xts03016
]
AB3X08_13965 (pnp)
Enzymes [BR:
xts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB3X08_13965 (pnp)
Messenger RNA biogenesis [BR:
xts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB3X08_13965 (pnp)
Transfer RNA biogenesis [BR:
xts03016
]
Prokaryotic type
tRNA degradation factors
AB3X08_13965 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_PNO1_2nd
DUF7680
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
XEA98265
LinkDB
All DBs
Position
complement(3328149..3330257)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFKGPIGAAKVGYKNGEYILNPTVTELKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINIINELTVEAGTKPSDWVAPAKNEG
MIAALKEAVGDQLASAFQVRDKLQRRDAISAIKKDVLAQLAPRATVEGWVAADLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVKAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGEDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTTPRSELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVSDVLKEGDLVKVKVLEVDKQGRIRLSMKAVEEGEGVSAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggcgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggtcaggacttcttcccgctgacggtc
gactatcaggagaagttctacgccggcggccgcatccccggcggcttcttcaagcgcgag
ggtcgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgcgctgtcgctggcc
ggcaccccgttcaagggcccgatcggcgccgccaaggtcggctacaagaacggcgaatac
atcctcaacccgaccgtcaccgagctgaaggattcgcagctggagctggtcgtggccggt
accgccaatgcggtgctgatggtcgagtccgaagcggcgctgctgtccgaagaagtgatg
ctgggcgcggtcaccttcggccaccgcgaaatgcagaaggtcatcaacatcatcaacgag
ctgaccgtcgaagccggcaccaagccgtcggactgggtcgctccggcgaagaacgaaggc
atgatcgcggcgctgaaggaagcggtcggcgatcagctggcctcggcgttccaggtgcgc
gacaagctgcagcgccgcgacgcgatctcggcgatcaagaaggacgtgctggcgcagctg
gcgccgcgcgccaccgtcgaaggctgggtcgccgccgacctggccaaggaattcggcgag
ctggaataccagaccatgcgcggctcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacacggtgcgtccgatcagcgtcaaggccggcgtgctgccgcgtacccatggt
tcggcgctgttcacccgcggcgagacccaggcgatcgtggtcaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtcagcggcgagtacaaggaaaacttcctgttccat
tacaacttccccccctactcggtgggcgagtgcggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggcgtgctggcggtgatgccgagcatggaa
gagttcccgtacacgatccgcgtggtctcggaaatcaccgagtccaacggttcctcgtcg
atggcttcggtctgcggcagctcgctggcgctgatggacgccggcgtgccggtgaaggcg
ccggtcgcgggcatcgcgatgggcctggtcaaggaaggcgaggacttcgtggtgctgtcg
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
gaaggcgtgtccgcgctgcagatggatatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctggcgcaggccaaggccggccgcctgcacatcctcggcgagatggccagc
gcgctgaccaccccgcgttcggagctgagcgactacgcgccgcgcctgctgacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaagacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgctgcgcaggccgccaaggcgcgcatcgagcagatcacctcggacgtg
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtgtcgcagatctccagcgaccgcgtc
gagaaggtcagcgacgtgttgaaggaaggcgatctggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaggccgtggaagaaggcgagggcgtgtcg
gccgagtaa
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integrated database retrieval system
