Xanthomonas tesorieronis: AB3X08_13975
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Entry
AB3X08_13975 CDS
T10866
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xts Xanthomonas tesorieronis
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xts03016
]
AB3X08_13975 (truB)
Enzymes [BR:
xts01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3X08_13975 (truB)
Transfer RNA biogenesis [BR:
xts03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3X08_13975 (truB)
Prokaryotic type
AB3X08_13975 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XEA98267
LinkDB
All DBs
Position
complement(3330894..3331820)
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AA seq
308 aa
AA seq
DB search
MPVFGPRLPRISFRRLDGIVLLDKPAGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYDAEIVLGVSTDSDDADGAVLRTRPVPPIDAATLQAALAP
LRGRIRQRAPIYSALKQGGEPLYAKARRGEAIEAPEREVEVHAIDVLAHDNERLRLHVAC
GSGTYIRSLARDLGEALGCGAHIAGLRRLWVEPFRQPQMVTLERLQQLAAQEPEALEALL
LPLAAGLVDFPPVRLDHAAAQRFRMGQRLRDAAWAPGAVAVFGDDGVPLGLGQIDAGGLL
APQRMFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttcggcccccgactgccccgcatctccttccgccgcctcgacggcatcgtg
ctgctcgacaagccggccggcatgagttccaacgcggcgctgcaagcggcgcggcggctg
ttccgtgccgagaagggcggccataccggcagcctggacccgctggccaccggcctgctg
ccgctgtgcttcggcgaggcgaccaagctggccgggctgctgctgggatcggccaaggcc
tacgacgccgagatcgtgctcggcgtgagcaccgacagcgacgatgccgatggcgcggtg
ctgcgcacccggccggtgccaccgatcgacgcggcgaccctgcaggcggcgctggcgccg
ctgcgcggccgcatccgccaacgcgcgccgatctattcggcgctgaagcagggcggcgag
ccgctgtacgccaaggcgcgccgcggcgaagccatcgaggcgccggagcgcgaggtcgag
gtgcatgcgatcgacgtgctcgcccacgacaacgagcgcctgcgcctgcacgtggcctgc
ggttccggcacctatatccgcagcctggcccgcgacctgggcgaggcgctgggctgcggc
gcgcatatcgcgggcttgcgccgcttgtgggtggagccgttccggcagccgcagatggtg
acccttgagcggctgcagcaattggccgcgcaagagccggaggccctggaggcgctgctg
ctgccgctggccgccggcctggtcgattttccgccggtgcgcctggatcatgctgcggcg
cagcgttttcgcatggggcagcggctgcgcgatgccgcctgggcgcccggtgcggtcgcg
gtgttcggcgacgacggcgtgccgctgggattgggccagatcgatgccggcgggctgctg
gcgccgcagcgcatgttcaacctctga
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