Xanthomonas tesorieronis: AB3X08_18485
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Entry
AB3X08_18485 CDS
T10866
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xts Xanthomonas tesorieronis
Pathway
xts00040
Pentose and glucuronate interconversions
xts01100
Metabolic pathways
xts02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xts00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AB3X08_18485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3X08_18485
Enzymes [BR:
xts01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AB3X08_18485
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XEB02137
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Position
complement(4349093..4350196)
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AA seq
367 aa
AA seq
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MALAVCLAGAAGSAYADASLEVASTGWATQNGGTKGGSKAAAANVYSVSTAAQLKTALKA
SVGSNGRIIKISGIIDVSEGTPYSTTADMKSRARLDIPTKTTLIGVGSNAQIREGYLYVK
ANDVIIRNLTIENPWDPQPVWDPDDGSAGNWNSEYDGLTIEGASNVWVDHVTFTDGRRTD
DQNGTENGRPKQHHDGALDIKKGANYVTVSYSAFKSHEKNNLIGSSDSASSTDSGKLKVT
IHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESKIFSENNAFDI
SGVSSCDKIAADYGGSVYRDFGSLLNGKALTCSWNNSIGWTPPYTYSLLPANQVASDVKS
KAGAGKL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgcagtctgtctggcgggcgcggccggcagcgcctatgccgatgccagcctg
gaggtcgccagcaccggatgggcgacgcagaacggcggcaccaagggcggctccaaggcc
gcggcggccaacgtctacagcgtcagcaccgccgcgcaactgaagaccgcgctgaaggcc
agcgtcggcagcaatggccgcatcatcaagatcagcggcatcatcgacgtcagcgagggc
acgccgtacagcaccaccgcggacatgaagagccgcgcgcgcctggacatccccaccaag
accacgctgatcggcgtcggcagcaatgcgcagatccgcgagggctatctgtacgtcaag
gccaacgacgtgatcatccgcaacctcaccatcgagaatccgtgggatccgcagccggtg
tgggatccggacgacggcagcgccggcaactggaattccgagtacgacggcctgaccatc
gaaggcgccagcaacgtgtgggtggaccatgtcaccttcactgacgggcgccgcaccgac
gaccagaacggcaccgaaaacggccgtcccaagcagcaccacgacggcgcgctggacatc
aagaaaggcgcgaactacgtgaccgtctcgtattcggcgttcaagtcgcacgagaagaac
aacctgatcggttccagcgacagcgcctccagcaccgacagcggcaagctgaaggtgacc
atccacaacaccctgttcgaaaacatttccgcgcgcgcgccgcgggtgcgcttcggccag
gtgcatctgtacaacaactaccacgtcggcagcaccagcaacgcggtgtacccgttctcg
tatgcgcacggcgtcggcaaggagtcgaagatcttctcggagaacaacgccttcgacatc
agcggggtcagcagctgcgacaagatcgccgccgactacggcggcagcgtgtaccgcgat
ttcggctcgctgctcaacggcaaggcgctgacctgctcgtggaacaacagcatcggctgg
acgccgccgtacacctattcgctgctgccggcgaaccaggtggcgagcgacgtcaagtcc
aaggcgggtgccggcaagttgtga
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