Xylella taiwanensis: AB672_00715
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Entry
AB672_00715 CDS
T05568
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB672_00715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_00715
Enzymes [BR:
xtw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AB672_00715
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AB672_00715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXI82600
UniProt:
Z9JGL8
LinkDB
All DBs
Position
189755..190555
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AA seq
266 aa
AA seq
DB search
MRIASFNANGLRSAVSKGFFDWFATQRIDVLCVQETKAQKHQLVGPDFLPAGYQACFRDA
TTKKGYSGVAIYSRCEPDELRTTLGWVEFDEEGRYLEARFGSLSVVSFYIPSGSSGERRQ
DYKFQVMRWLRPMLCEWLISGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDWLN
GLCADSLDEVNPAQGRGWIDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLR
ERLSHCAIYREQCFSDHAPYIVEYVL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgagaatcgccagttttaatgccaatgggttgcgatcggctgttagcaagggtttcttt
gattggtttgctacccagcggatcgatgtgctgtgtgtgcaggaaaccaaggcccagaaa
catcaactggtgggcccagattttttgccggctgggtatcaggcctgttttcgggatgcg
acgactaagaagggttatagcggcgtggcgatttacagtaggtgtgagccggacgaactt
cgcaccacgttgggctgggtcgagtttgacgaagaaggccgttatctggaggcgcgattt
ggaagcctgagtgtggtttcgttttacattccttcgggttcttcaggggagcggcgccag
gattataagttccaggtcatgcgctggttgcgtccgatgctgtgtgagtggctcatcagt
ggtcgggattatgtgttgtgtggtgattggaatatcgtgcgcagtgcattggatattcgt
aattggaaatctaatcagaaaaattctggttgcttaccgttggagcgtgattggctcaat
ggcctatgtgccgactctctcgatgaggttaacccggctcaggggcgcggctggattgat
acttaccgtgtattgcatccacaaggtgaggattacacctggtggagcaaccgtggcgcg
gcgcgcgtcaacaatgtgggatggcggatcgattaccagttcgtctctccaggcttgcgt
gaacgcctgtcgcactgtgcgatttaccgtgagcagtgcttctctgatcacgccccttac
attgtggagtatgtgttgtga
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