Xylella taiwanensis: AB672_02380
Help
Entry
AB672_02380 CDS
T05568
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xtw
Xylella taiwanensis
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtw03032
]
AB672_02380
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_02380
Enzymes [BR:
xtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB672_02380
DNA replication proteins [BR:
xtw03032
]
Prokaryotic type
DNA Topoisomerases
AB672_02380
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB672_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF7242
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AXI82882
LinkDB
All DBs
Position
complement(586476..588911)
Genome browser
AA seq
811 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENDFAMRYDLIDKN
EKHIEAITKAAKTADGIYLATDPDREGEAISWHIAEILKERGLLKDKPMQRIVFTEITPR
AIKEAIQKPRTIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFITREYWSIHAECAHPTQHFSAKLIKLDGQKFEQFTITNGDTAAAAQLRIQQ
AAQGRLHITDVASKERKRRPAPPFITSTLQQEASRKLGFTTRKTMQIAQKLYEGIALGEE
GSVGLITYMRTDSVNLSQDALSEIRDIIARDYGTNTLPDKPNVYTTKSKNAQEAHEAVRP
TSALRTPTQVAPYLSNDEHRLYELVWKRAVSSQMIPATLNTISVDLAAGNEHVFRATGTT
VVVQGFLAVYEEGKDNKNAEDDDEGRKLPTMKTGETVPLERILTEQHFTQAPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVDMEGRSFRPTDIGRAVSKFLASHFTRYVDYDF
TARLEDELDAISRGEEEWVPLMKKFWTPFKELVEDKKDSLDKTDAGSVRMLGTDPASGKE
VSARIGRFGPMVQIGTVDDEEKPRFASLRPNQSIYSISLEEAMELFKMPRVLGEDKSQQV
SVGIGRFGPFAKRGSTYVSLKNEDDPYTIDLARAIMLINEKEEIARNRIIKDFDNSEIQV
LNGRFGPYLSDGKLNGKIPKDREPASLTLEEAQQLLTETGKPIRKNFSTKKTTTKNETRK
QATGKHTATGKAIKKMSGKTVTKQMKKHLAS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacaccttcttatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaagatttcaccgtcttagcctcttacgggcatgtacgcgacttggtacctaag
gaaggcgcagtcgatccagaaaacgactttgcgatgcgctacgacctgatagacaagaac
gaaaagcacatcgaagcaatcaccaaagcggccaaaacagccgacggcatctatctggca
accgacccggatcgtgagggcgaagcgatcagttggcacatcgccgagatccttaaagaa
cgtggattattgaaggacaaaccgatgcagcgcatcgtgttcaccgagatcaccccacgc
gcgatcaaggaagcaattcaaaagccgcgtacgattgccagcgatctggtagacgcccag
caagcacgtcgtgcattggactacctggttggcttcaatctctcaccagtgctgtggcgc
aaagtacaacgcggtttatcagcaggccgtgtgcaatcgccagcactgcgcatgattgtc
gagcgcgaagaggaaatcgaagccttcatcacacgcgaatattggagcatccatgccgaa
tgtgcgcatcctacccaacacttcagtgccaaactcatcaaattggatgggcaaaagttc
gaacaattcaccattaccaacggcgacactgccgcagccgcacaactaaggatccaacaa
gccgcacaaggacgcctgcacatcaccgacgttgccagcaaagaacggaaacgacgccct
gcgccgcccttcatcacatccacattacagcaggaagcctcacgcaaactcggtttcacc
acacgtaaaacgatgcagattgcacagaaactttacgagggcatcgcactgggtgaggag
ggcagcgtcggtctgattacctacatgcgcaccgactcagttaacctgtcgcaggatgct
ctatcggaaattcgcgacatcatcgcacgcgattacggtaccaacacactcccagacaaa
cctaacgtctacaccaccaagtccaagaacgcgcaggaagcgcacgaagcggtacgcccg
acctcagcattgcgcacgccgacacaggttgcaccgtatctttccaacgacgaacaccgg
ctatacgaactggtgtggaaacgcgcagtgtcctcccagatgatcccggcgacactcaac
accatcagcgtcgacctggccgctggcaacgaacacgtatttcgtgccaccggaaccacc
gtagtggtacaaggtttcttagccgtgtacgaagaaggcaaggacaacaagaacgctgaa
gacgatgacgaaggccgcaaactccccacaatgaaaaccggggaaactgtgccgctggaa
cgtatcttgaccgaacagcactttacacaggcaccaccacgttacaccgaagccgcgttg
gtcaaagcactcgaggaatacggcatcggtcgtccatcgacttacgcctcgatcatccaa
acgctgctattccgcaagtacgtagacatggaaggccgcagtttccgcccgacggacatt
ggccgcgccgtgtccaaattcctcgcaagccactttacccggtacgtggactacgacttc
accgcacgcctggaagatgaattagatgcgatctcgcgcggcgaggaagaatgggtcccg
ctgatgaaaaaattttggactccattcaaggaactggttgaagataagaaagattcactc
gacaaaaccgacgctggcagcgtacgcatgctcggcaccgaccccgccagcggaaaggaa
gttagcgcacgcattggccgcttcggaccgatggtgcaaattggcaccgttgatgacgaa
gaaaagccgaggtttgcttcgttacgccccaaccaaagcatctactccatcagcctcgaa
gaggcgatggaactattcaaaatgccgcgtgtgcttggggaggacaaaagccagcaagtc
agtgtcggcatcggccgcttcggtccgtttgccaagcgcggcagcacttatgtctcgctg
aagaatgaggatgatccttacaccatcgacttggcacgcgcaattatgctcatcaacgag
aaggaagaaatcgcgcgcaatcggatcatcaaagacttcgacaacagcgagattcaggta
ctgaacgggcgcttcggcccctacctgagcgatggcaaactcaacggaaaaatccccaag
gatcgcgaaccagcctcactgactctcgaagaagcacagcaattactcacagaaaccggt
aaaccgatacgaaaaaacttcagtacgaagaaaaccacaaccaagaacgagactcgcaaa
caagcaaccggcaagcacaccgcaacaggaaaggcaatcaaaaaaatgtcaggcaagacc
gtaacgaagcaaatgaaaaaacaccttgcctcctaa
DBGET
integrated database retrieval system
