Xylella taiwanensis: AB672_02560
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Entry
AB672_02560 CDS
T05568
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03030
DNA replication
xtw03410
Base excision repair
xtw03420
Nucleotide excision repair
xtw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB672_02560
03410 Base excision repair
AB672_02560
03420 Nucleotide excision repair
AB672_02560
03440 Homologous recombination
AB672_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtw03032
]
AB672_02560
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_02560
Enzymes [BR:
xtw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB672_02560
DNA replication proteins [BR:
xtw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB672_02560
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB672_02560
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB672_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AXI82913
UniProt:
Z9JKL3
LinkDB
All DBs
Position
617496..620261
Genome browser
AA seq
921 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAEGEPTGALFGVVNMLRTTLKERPDYAAFVIDAPG
KTFRDDLDPEYKMHRPPMPDDLRVQVQPMCGIVHALGIDILCIDGVEADDVIGTLALAAI
ADGIAVTISTGDKDFAQLVRPGVVLVNTMSGSRMDSDMAVIDKFGVAPSQIIDLFALMGD
AVDNVPGVDKCGPKTAAKWLGEYGSLDAVIANADKIKGKIGDNLRAALPRLLLNRALVTI
KTDVALDKHPQDLVLRERDTDALRGFYQRYGFTQALKELDGRSVEATVVEQEPGRARLAG
FRAAPDPSVAMDIDPALSAQGEYETIFTIEQLQDWMVRLRVAGQFAFDTETDSLDPMQAA
LVGLSFAAEMGRAAYLPLGHDYPGAPVQLDRGQALALLQPLLEDATVRKLGQHGKYDMHV
LRRYGIVLAGYADDTLLESFVLTSGNARHDMDTLARRHLGYETIKYVDVAGKGAKQIPFS
HVGVDEATQYAAEDADITLRLHRILAPQLIAEPSLERVYREIEMPLIPVLERIEANGVQI
DAEQLYKQSADLSRRMIAAQQKAMELAGRTFNLDSPKQLQVLLFDELKLPAVVKTPKGQP
STNEEALESIADQHELPRVILEYRSLAKLRNTYTDKLPEMIHPDTGRVHTNYHQTGAATG
RLSSSDPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYSQIELRIMAHLSGDAGLVDAF
ESGVDVHCAIAAEVFGRSLDEVTPNERRAAKAINFGLIYGMSAFGLARQLGISRSEAQDY
IALYFGRFAGVRDFMENTRQQARDRGYVETVFGRRLYLNSIASGNQTQRAGAERAAINAP
MQGTAADIIKRAMVTVDDWLAKYREWALMILQVHDELVFEVDEDFVPTLVHEVSTRMASA
AQLRVPLVVDVGIGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagttttgatcgacgggtccagttacctctatcgtgcgtttcatgcattg
ccgccgctcagcaacgcagaaggtgaacccaccggtgctctgtttggtgtggtcaacatg
ttacgtactacgctgaaggagcgcccggactatgctgcttttgtgattgatgcaccaggc
aagacatttcgcgatgatcttgatcccgaatacaaaatgcatcgcccaccaatgcctgat
gatttgcgtgtgcaggtgcagccgatgtgcgggattgtgcatgcgttaggcatcgatatc
ctgtgtattgatggggttgaggccgatgatgttatcggtacattggctttggctgccatt
gctgacgggattgccgtgacaatttctacgggtgacaaggatttcgctcagttggtccgt
ccaggcgtggtattggtcaacaccatgagtggcagtcggatggattccgatatggcagtg
atcgataaattcggagttgctccgagtcagatcattgatctgttcgcgttgatgggcgat
gcggtggataacgtaccgggtgtggataaatgcgggccgaagacggcagcgaagtggtta
ggggagtacggttcactggatgctgtcatcgccaatgctgacaagatcaaaggcaaaatt
ggtgacaatctgcgtgctgcgctgccacggcttttgttaaaccgcgcgctagtcacgatc
aagacggatgtggcactagacaagcacccgcaggatttggtgctgcgtgagcgtgatact
gacgcgctgcgtggcttttaccagcgctatggcttcacccaggcactgaaggagctggat
ggccgcagtgttgaagccactgtggtcgagcaggagcctgggcgtgcgaggcttgcaggt
ttccgtgctgctccggacccatcggttgcaatggacatcgacccagcgctgtctgcacag
ggagagtacgagacgattttcacaatcgaacagttacaggattggatggtgcggttacgg
gtggcgggtcagtttgctttcgacaccgagaccgatagtcttgatccgatgcaagcagca
ctcgttggcctgagttttgctgctgaaatggggcgtgcggcttacctgccgcttggtcat
gattatcctggtgcgccggtgcagcttgatcgcgggcaggcgctggcgttactgcaaccg
ctgctggaggatgcaacagtgcgtaaattgggccagcatggcaaatatgacatgcatgtg
ctgcgccgctacggcatcgtgctggctggctatgctgacgacactttgttggaaagcttt
gtactcacttccggcaatgcccgtcacgacatggataccttggctaggcgccatcttggt
tacgagaccattaagtatgtcgatgtggcgggtaagggagccaaacagattcctttctcc
cacgtgggggttgacgaggcgactcagtacgctgctgaggatgctgatatcaccttgcgc
ttgcaccgcatcctggcgccgcagttgattgccgagccaagcttggagcgagtctaccgt
gaaatcgaaatgccgctaataccggtgcttgagcgcattgaggccaacggtgtgcagatt
gatgcagagcagctgtataagcagagtgctgatttgtcgcgacgtatgattgctgcgcag
cagaaagcgatggaactggcagggcgcaccttcaacttggattcgcctaagcagttacag
gtactgctgttcgatgaactgaagctgccagcagtggtgaagacgcctaaggggcagcca
tcgaccaatgaggaggcgttggagtcgattgctgatcagcatgagctaccgcgtgtcatt
ctggaataccgcagcttggccaagttacgcaatacctacactgacaagctgccggaaatg
atccatccggacactgggcgtgtacataccaattatcatcagaccggtgctgccaccggg
cggttgtcctcatccgatcccaacttgcagaatatcccgattcgtaccgatgatggtcgg
cgtatccgccgtgcttttgtcgcgccttctggacgtaagttgattgcttgcgattattca
cagatcgaattgaggatcatggcgcatctatccggtgatgcagggctggttgatgctttc
gagtctggcgtcgacgtgcactgtgcgattgctgcggaggtgtttggtcgcagccttgat
gaggtgacgcctaacgagcgtcgtgcggcgaaggcaatcaattttggcctgatatacggt
atgagcgcatttggcttggcgcgtcagctcggtatcagccgcagtgaggcgcaggattac
attgcgctgtactttggccgctttgccggggtgcgtgattttatggaaaacacacgtcag
caggcacgcgatagaggatacgtagagacggtgttcggtcgccgtctctatttaaactcc
attgccagtggtaaccagactcagcgtgccggtgccgagcgcgcagcgatcaatgcgcca
atgcaggggactgccgctgatatcatcaagcgtgccatggtcacagtggatgattggttg
gcgaagtatcgggagtgggcgctgatgatcttgcaagtacacgatgaattagtgttcgag
gtggatgaggatttcgtaccaactttggtacatgaagtgtcgacgcggatggcttcggcg
gcacagttgcgcgtgccgttggttgtcgatgttggtatcggtaataactgggatgaggcg
cactga
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