Xylella taiwanensis: AB672_02595
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Entry
AB672_02595 CDS
T05568
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03410
Base excision repair
xtw03430
Mismatch repair
xtw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB672_02595
03430 Mismatch repair
AB672_02595
03440 Homologous recombination
AB672_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_02595
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AB672_02595
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB672_02595
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB672_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF5122
Motif
Other DBs
NCBI-ProteinID:
AXI82918
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Position
628497..630296
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AA seq
599 aa
AA seq
DB search
MWCAHETGRVSVPRIIRRLSLPAGVWPDHVPPLLRRLYAARGCADWVTAQPCLAQLLSPA
TLSNMNAATALLAEVIKADGRILVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMV
HGYGLSSTLIEELAPLQPALLVTVDHGIACHAGVAAAKARGWRVLVTDHHLPSETLPLAD
VIVNPNLPGDLFPSKALAGVGVIFYVLLALRARLYPCAHLEHDGQKTAIHSSSAQKSRPD
LTSLLDLVAVGTVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEMSSRDESQLTAS
DIGFALSPRLNAAGRLEDMALGIELLLSEDWTQARGIAAMLEEINATRRVVQQSMSDEAE
QVVEQAMLQSDGVLPMAVCLFDPHWHPGVIGLVASKLKDKLHRPVVALAPAEPGSTLLRG
SARSIPGLHIRDVLAALDSRHPGVIQKFGGHAMAAGLTLDGEALPAFERAFRAQVEIMVD
TSVLHAELHSDGELAAHELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKGRHLK
MELRHAGRHEALSAIHFNGWRGDPPARRLRLAYRLVCDDYRGGDAIQLIVEHWEVTERD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgtggtgtgcgcacgaaactggccgagtgagtgtgcccaggatcattcgtcgtctctcc
ttgccggcgggcgtttggcctgaccatgtgccgccattgttgcgacgtttatacgctgca
cgtggttgtgccgattgggtgaccgcgcagccttgcctcgcccagttattgtcaccagcc
acgctgagtaacatgaatgcagctactgcattgctggccgaggtcatcaaggccgatggg
cgtatcctggtcgtcggtgattttgactgcgatggcgcaacggcttgtgcggttgcagta
cgtggtttgcgtttgcttggggcgcgcaacgtgatgcacgcggtccccaatcgtatggtg
catggctacggtttatcgtcgacattgattgaggagctggcaccgttgcagccagcgttg
cttgtcacggttgaccacggtattgcttgccatgctggcgttgctgctgctaaggcgcgt
ggttggcgggtgttagtgaccgatcaccatttgcccagtgaaaccttgccactcgccgat
gtcattgttaatccaaatctgcctggtgatctgtttccgagtaaagccctagctggtgtc
ggggtgatcttttatgtgctgcttgccctgcgtgcgcggctgtatccttgtgctcatctt
gagcacgacggtcaaaaaacggctatccacagctctagtgctcaaaaaagccgtcctgat
ctaacgtccttactcgatttggtggcggttggcactgttgctgacctggtaccgttagat
actaataatcgtgctttggttgctgctggcttgcgccgcctgcgtcgcggtcaggggtgt
ctcgggttgcgtgcgctgatcgagatgagtagccgtgatgaatcgcaactgaccgccagc
gatatcggttttgcgctgagtccacgtctgaacgctgctgggcggctggaggatatggcg
ttgggtattgaactattgctcagtgaggattggactcaggcgcgtggtatcgcggccatg
cttgaggagattaatgccacacgccgtgtcgtacagcagagcatgagtgatgaggccgag
caggtagtggagcaagcgatgttgcagtcagacggcgtgttgccaatggccgtctgcctg
ttcgatccgcactggcatccaggggtgattggcttggtcgcgtctaaacttaaggacaaa
ctgcaccgtccggtggttgctttggccccggctgagccgggcagcacattgttgcgaggg
tcggcacgctcgattccagggctgcatatccgcgatgtgttggccgcgcttgatagccgc
catcccggggtgatacagaaatttggaggtcatgcgatggcggctggcctcactctggat
ggcgaggcgctgccggcattcgaacgtgcattccgtgcccaagtcgaaatcatggtcgac
acgagtgtgttgcatgctgagttgcatagcgatggtgaattggcggcgcatgaactggac
gccttacatgcgcgggcgctgcgactgggtgggccatggggacagggtttcccagagcca
ttattcgacggcgagtttgaggtgctgcaatggcgggtactcaaagggcgtcatttgaaa
atggagctgcgtcatgcgggacggcatgaagccctgagcgcgatccatttcaacggctgg
cgcggcgatcctccagcgcggcgactgcgcttggcttatcggttggtgtgcgacgattac
cgcggtggtgatgcgattcagttgatcgtggaacattgggaagtcactgaacgcgattga
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