Xylella taiwanensis: AB672_08400
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Entry
AB672_08400 CDS
T05568
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
xtw
Xylella taiwanensis
Pathway
xtw02020
Two-component system
xtw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB672_08400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB672_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtw03021
]
AB672_08400
Transcription machinery [BR:
xtw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB672_08400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
MarR
HTH_Crp_2
HTH_11
HTH_31
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AXI83951
UniProt:
A0ABS8TT76
LinkDB
All DBs
Position
1953578..1954954
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AA seq
458 aa
AA seq
DB search
MKATLRTSMGQQLVMTPQLHQAIRLLQMSSTELELEITAAIESNPLLDWAENQSPETKPD
AETETEDWHAKESTWNINGSKDNGNDDDNPIERLAAGNSLTDHLMWQLHLSPLSARDYQI
GTTLIDALEEDGYLREPLSTVASTLAPLSVDETELLPVLRYIQSFDPTGVAARSLGECLA
LQLKSLKKEVPGHTLALQIVESPLLQQLPRSGVAGLARELKLPSQEVEQAVQLIRRLDPR
PGKKIGDLEVGTYIIPDCVIWRQRGLWHAALSERALPQVVIHHGYEQLINRCDGANAGYL
RSQLQQARWLLKSLEARGATLLKVVNSLLRHQTGFLEFGEQALRPLTIRELAIELGLHES
TVSRAIAGKYVRTPRGTLPLRAFFASGIGTHSGEETSNCAIQAMIRRLIETENPRKPLSD
AKLAELLKTSGISVARRTIAKYRDAMNISASHERVRVL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaacgctgcgaacatccatgggacaacagctggtcatgacaccccagctacac
caagccatacgcctgttgcaaatgtcaagcaccgaattggaactggaaattacggctgcg
atagagagcaatccactgctggactgggccgagaaccaatcaccggagaccaagccagac
gctgaaactgaaactgaagactggcatgccaaggaatcaacctggaatatcaacggcagc
aaagacaacgggaatgacgacgacaaccctattgagcgtctagccgccgggaatagtctg
actgatcacctgatgtggcaactgcacctatccccactatcggcacgtgattatcaaata
ggtaccaccttgattgatgcgttggaagaagacggttacctgcgtgaacctctttccacg
gtcgcttcgaccctagccccgttatctgtggatgaaaccgaactgctaccagtattacga
tatattcaatccttcgacccgacgggcgtggctgcacgctccctgggcgagtgtttggcg
ctgcagctaaaatcattgaaaaaggaggtacccggacacacacttgcacttcaaattgtc
gagagcccactgctacaacaattgccgcgcagcggtgtagccgggctggcacgcgagtta
aaactgccttcacaagaagtcgaacaagcagtgcaattgatccgtagattggacccccgc
ccaggcaagaaaattggtgacttggaagtcggcacctacattattccggactgcgtgatc
tggcgccaacgtggactctggcacgccgctctgtcagaacgtgcactaccacaagtggtc
atccaccacggctacgagcagctcatcaaccgctgtgatggcgccaatgctggctacctg
cgcagccaactgcaacaagcccgttggctgctcaagagtctagaggcacgaggtgcaacc
ttgttaaaagtggtcaacagcttgctacgtcaccaaacagggtttttggaattcggtgaa
caagcgttacgtccactgactatccgcgaattagccatcgaacttggcctgcacgagtcc
acggtatcccgtgcgattgccggcaaatatgtacgcaccccacgcggtaccttaccacta
cgcgcgttcttcgcttcgggaatcgggacccacagcggtgaagagacctccaactgtgcc
attcaagcaatgatcagacgtctgattgaaactgaaaacccccgtaaaccgctgtctgac
gccaagctggctgaactgctgaagacctctggtatttcagtggcgcggcgcaccatagcg
aagtatcgtgatgccatgaacatctccgcatctcacgaacgcgtccgggtcctctga
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