Xylella taiwanensis: AB672_09395
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Entry
AB672_09395 CDS
T05568
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB672_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_09395
Enzymes [BR:
xtw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB672_09395
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB672_09395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXI84135
UniProt:
A0ABS8TV76
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All DBs
Position
complement(2191278..2194628)
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AA seq
1116 aa
AA seq
DB search
MFPMMVTTDFRLYHSNALEVLAGLLAETLQTPVPGQSLLVPDTVLIPQAAVRRWLQATLA
TTHGVVANLEFLTPGEFVARALEANLGALPNTLDAAALRWRLYAALCDPALLAQPALAEL
RAYLADGDAFKPWTLAEELSGVFEKYQAWRCDWLLRWEAGADPDDPQAILWRHIVSGTTY
RAHRIQEYLNRYGPGTAQRPQGLPARLFIFATINISPDVLRVLATQAQVGTLHFYLPTPT
QEYCGDVQTWGQRLHQTAPFLSQTGENRLLHAWGAAGRDFMAMLGSYEVVHPSGEITAYD
DPEQRPGATLDEGGLRDSLLQRLHADLFHNRSVPVPAPLPAPRLEDPSLQFHACHTRLRE
LQVLHDRLRALLEPTSPEGQRCHPPLQPRDIAVLAPDIDLYIPYLEAVFGGHGHPDPLPY
ALADASPLIEEPLAEVFLRLLDLPVSRFGLHEVLDLFASLPAGFDTYTLERLRSWLTAAG
ARWALDAAHRAQHQAPADDAYTWRFALDRLLLGHASGEDADIVGVATWPDLEGGMLTALD
TLIRLLRVLAQTRQRLGEALLPAQWRERLLGLLDALLPDMPIAPDKQRILERLRRLIDTF
ASDAARAGVALPVPAEVVRMHFTALLAAVDTRAPLLTGGISIGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGTSQRRPGDRSRRDDDCFLFLQLFTAAQDVFYVSYLGA
DPRDGNVREPSPLVTELLGTAAAYHADPSAAAKTLLLRHSLQPFAPIAFGAGGDPRRFSY
HPLWHAAAASIGGHRQPLEPWSHTRLPALPEPESSLPLDMLRRFFSAPTEQFLQQRLGLR
LPEPPQATEECEPLWLPSHGLDRHRLDTLVFAYLLDGAESTLYLRLRARALLPSGPLGER
QLRERIESVRPYAQAFAQWRGTAPSQSQWLEVTIDGVRLHGRIQDVYPQGMARLRLGTRN
GPAALRQGLDWLLASAAGQTGSLVRFEDAGVAGLGPHIQPLLPSSQAHAALTLLLRLRAV
GLRQPLAFGPHSGWEYYTLRQTPERAWTAARERWRGNEHQWGEGSTAAVQLALRGRDPFA
TPEDAARFAQLATVVFDALTTGHADPDTLTWLDLQP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgatgatggtcaccaccgactttcgcctataccactctaatgcactcgaagtt
ctggcgggactgctggccgaaacgttgcagaccccggtgccaggtcagtcgctgttagtc
ccagataccgtattgattccacaggcggccgtgcggcgttggttgcaagccacgctggct
accacgcatggagtggtggctaatctggaatttctcaccccgggcgagttcgttgcccgt
gctttggaagccaacctaggtgcgttgccgaacactttggatgcagccgcgttacgttgg
cggctgtatgcggcgttgtgtgatccagcattgctggcgcagccggcactggctgaatta
cgcgcttacctggctgatggcgacgccttcaaaccttggacattggctgaagaattgagt
ggggtattcgaaaaataccaggcttggcgttgtgactggctgctgcgctgggaggcgggc
gcagatcccgacgatccgcaggccatcctatggaggcacatagtgagcggtacgacatac
cgggcacaccgcatccaggagtacctgaatcgttatggcccaggtacagcgcaaaggcca
caaggattgcctgcgcgactgtttattttcgccacgatcaacatctccccggatgtatta
cgcgtcctggcgacccaggcacaggttggcacacttcacttttacctaccgacgccgacg
caagaatattgtggtgatgtgcagacgtggggccaacgcttgcaccagactgcccccttc
ctcagccagaccggagagaaccgcctgctacatgcctggggtgccgcagggcgtgatttc
atggccatgttggggagctacgaagtcgtccatccctccggtgaaatcacggcatacgac
gatccggaacaacgtccaggtgccacattggacgagggcggcctgcgcgatagcctgctg
cagcgtctgcacgcggatctattccacaaccgttcggtccctgttcccgcccccttgcca
gcaccgcgtctggaggaccccagtctgcagtttcacgcctgccatacccggctccgcgaa
ctccaagtactgcacgaccggcttcgcgccttactggagccaacctcgccggaaggacag
cgttgccacccgcccttgcaaccgcgtgacattgccgtgttggcgccggatatcgatctc
tacatcccctatctggaagcggtattcggtggtcatggccatcccgacccactgccatat
gcactggccgatgccagcccactcattgaagaaccgctggccgaggtgttcctgcgtctg
cttgatttgccagtctcacgcttcggtctgcacgaagtgctggatctgttcgccagcctg
cctgccggctttgacacgtataccttggagcgcctgcgaagttggctgactgccgccggc
gcgcgctgggcgctggatgccgcccaccgcgcccagcatcaggccccggctgacgacgcc
tacacctggcgctttgcactggaccgcctgttgctgggtcacgccagcggcgaggatgcc
gacatcgtcggcgttgccacctggccggatctggaaggtggcatgctgaccgcattggac
acactgatccgattgctgcgcgtcctggcgcagacccggcaacgcctgggtgaggccctc
ttaccggcgcaatggcgggagcgcttgctcggcctgcttgatgcattgctgccggacatg
ccgattgcacccgacaagcagcgtatcttagagcgcctacgcaggctgatcgacaccttt
gccagtgatgctgcacgtgccggagtggcgttgcctgtgcctgccgaagtagtgcgtatg
cacttcaccgcgctactggccgcagtcgatacccgtgcgcccttactcaccggtggcatc
agcattggccggatggttcccatgcgactacttccgttccgggtgatttgcctgttaggc
atgaacgatggcgacttcccgcgtcgtgatccggcagcggggctcaatcgtctgactgcc
gaacttggcacgtcgcagcgtcgccccggtgatcgttcccggcgtgacgacgactgcttt
ctgtttcttcaattgttcaccgcggcgcaggacgtgttctacgtgagctacctcggcgcc
gatccccgtgacggcaacgtacgcgagccttccccattagttacagagttgctcggcacc
gcagcggcgtaccatgccgacccgagtgcggcggccaaaacactcctactgcgacattca
ctacagccattcgcccccattgcgtttggcgccggcggcgatccccgccgcttcagctac
caccccttgtggcacgctgccgcggcgagtatcgggggacaccgacagcctttagaacca
tggagtcacacccgactgccggcgcttccagagccggaatcctccctgccactagacatg
ttgcggcgcttcttcagcgcacctacagaacagttcctgcagcagcgcctggggctgcgc
ttgcccgaaccgcctcaagcgaccgaggagtgcgaacccttatggctgcccagccacgga
ctggaccgccatcgactcgacaccctggtgtttgcctacctgcttgatggtgcggagagc
accttgtacctacggttgcgcgcgcgcgcgctgctgccctctggtcccttgggcgaacgg
caactgcgggagcgcatcgaatccgtgcgcccttatgcccaagcattcgcacagtggcgt
ggtacagcaccgtcgcagtcacagtggctggaggtgacgatcgacggcgtgcgtctgcac
ggacggattcaggacgtctacccgcagggaatggcacggctgcgcctgggcacccgcaac
ggtccggcggcattgcgtcagggattggattggctgttggccagcgccgccggccaaacg
gggtcgctggtccgcttcgaggatgccggtgttgctggcttgggcccgcatatacaaccg
ctcctgccgagttcgcaggcccatgcggcactgacgcttctgctccgcctgcgggccgtt
ggcctacgccaaccgctggccttcggcccgcatagtggctgggagtactacacacttcgc
cagacgcccgagcgggcatggacggccgcgcgtgaacgctggcgtggtaacgaacatcaa
tggggcgaagggagcactgcggcggtgcaattagcactgcgcgggcgcgatccgttcgcc
accccggaagatgcggcacgctttgcacagttggcaaccgtagtgtttgacgcactcacg
accggtcatgccgatccggatacgttgacttggctggatctacagccatga
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