Xylella taiwanensis: AB672_09760
Help
Entry
AB672_09760 CDS
T05568
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xtw
Xylella taiwanensis
Pathway
xtw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB672_09760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtw03400
]
AB672_09760
DNA repair and recombination proteins [BR:
xtw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB672_09760
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB672_09760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AXI84201
UniProt:
Z9JM52
LinkDB
All DBs
Position
complement(2298922..2300934)
Genome browser
AA seq
670 aa
AA seq
DB search
MTDLFQLVSSYSPSGDQPAAIQKLVANFHAGIAKQVLLGVTGSGKTYTIANVVERIQKPT
LVMAPNKTLAAQLYGEFKAFFPRNAVEYFVSYYDYYQPEAYVPASDTFIEKDSSINEYIE
QMRLAATKALLSRSDVLVVATVSAIYGLGAPDDYLSLRLILSLGEHIEQRQLIMHLIELQ
YTRNEFDLVRGSFRVRGEVVDVFPAESDAEALRIELFDGEIESLSLFDPLTGETLRKLQR
YSVYPKTHYATTRERTLSAVDTIKNELKAYLEHLYVQNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMFKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEMRSPRSIYVSATPGSYELRESAGEVTELVVRPTGLID
PEIEIRPVAMQVDDLISEVNACIKLGDRVLVTTLTKRMAENLTEYLSEQGIRIRYLHSEI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTSSLIQTIG
RAARSLRGRAILYADSVTRSMRAAIDETERRRQKQKEYNTQNGIVPKSVVRPINDILEGA
RDGVGVKAGNGKNRRIAEVPADYGVLSQAEIAARIKVLEQQMYQHARDLEFEAAARIRDQ
IQQLRAAGLV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgacagatttgtttcagcttgtttcttcatattctccttctggagatcagccggcggct
atacagaagctggtcgccaacttccatgctggcatcgctaagcaggtgctgctgggcgtg
accggttcaggtaaaacttacaccatcgccaatgtagttgagcggattcagaagccgact
ctggtgatggcgccgaacaagactttggctgcacagctttacggtgaattcaaggcgttc
ttcccgcgcaatgctgtagagtattttgtcagttactatgactactatcagcccgaggcg
tatgttccggcgtcggacactttcattgaaaaggacagttccatcaatgaatacatcgaa
cagatgcgtttggctgcaaccaaggcattgctgtcacgctctgatgtgctggtggttgcg
accgtgtcggcaatctatggtcttggtgcacctgatgattatctctcgttacgcttgatc
ttgtcgctgggcgaacacattgagcagcggcaactaattatgcacctcattgaattgcag
tacacgcgtaacgagttcgacctggtgcgcggcagcttccgtgtgcgtggcgaggtcgtt
gacgtattcccggccgagtcagacgcagaagcgcttcgaattgaattatttgatggagag
atcgaaagtttgagcctgtttgatccgctcactggtgagaccctgcgcaagctgcaacgc
tacagcgtctatcctaaaactcactatgcaacgacgcgcgaacgtacgctcagtgcagtg
gatacgatcaagaatgagctgaaagcgtacctggaacatctgtacgtgcagaataagttg
gttgaggcgcaacgcttggcacagcgtactcagtttgacttagagatgatggctgaggtc
gggtattgcaatggcatcgagaattactctcgtcacttaactggtaaggctccgggagag
ccgccgccgacgctgttcgattatctgccaccagatgcactgctggtcattgatgagtcg
cacgtgacaatcccgcagattggtgcgatgttcaagggagaccgctcgcgcaaagagacg
ctggtggaattcggtttccgcttgccgtctgcgttggacaatcggccgctccgctttgaa
gaatgggagatgcgttcgccacgtagcatctatgtctcggcgacgcctggatcgtatgag
ctacgtgagtccgcgggtgaagtcacagagttagtcgtgcgtccaaccggtttgattgat
cctgagatagagatccgcccggttgcgatgcaggtggatgatctgatttccgaagtcaat
gcgtgtatcaagttaggtgatcgggttttggtcaccacgttaactaagcgcatggccgag
aacctgactgaatatttgagtgagcagggtatccggatacgctacttgcattcggaaatc
gatactgtggaacgtgtagagatcatccgcgatttgcgtttgggcaagtttgatgtgctg
gtcggcatcaaccttctacgcgagggattggatatgcccgaggtgtcgttggtggcgatt
cttgacgctgacaaagagggatttctgcgttcgaccagttcattgattcagacgattggt
cgcgccgcacgcagtttacgtggcagggcgattttgtatgccgatagcgtgactcgttca
atgcgcgctgcgatcgatgaaaccgagcgacgccgacagaagcagaaggaatacaacacc
cagaacggtattgttccgaaatcagttgtacggccaattaacgacatcctggagggtgcc
agagatggtgtcggggttaaggctggtaatgggaagaatcgcagaatcgccgaggttcca
gccgattatggggtgcttagtcaagctgagattgctgcacggataaaagtgttggagcaa
cagatgtaccagcatgcgcgtgacttggagttcgaggcggcagcgcgtattcgagatcag
attcagcagctcagggcggctggtctggtttga
DBGET
integrated database retrieval system
