Xylella taiwanensis: AB672_10700
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Entry
AB672_10700 CDS
T05568
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
xtw
Xylella taiwanensis
Pathway
xtw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB672_10700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtw03019
]
AB672_10700
Enzymes [BR:
xtw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB672_10700
Messenger RNA biogenesis [BR:
xtw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB672_10700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RhlB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXI84365
UniProt:
Z9JI79
LinkDB
All DBs
Position
complement(2530126..2531778)
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AA seq
550 aa
AA seq
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MSDKSLTNINFYSFDLHPMLLAGLTDAGFTLCTPIQALTLPGALAGRDIAGQAQTGTGKT
LAFLVTVVNRLLSRSGLVNRKPEDPRALILAPTRELAIQIYKDVLKFGSNLGLRFALIYG
GVDYDKQRELLRKGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDI
RFILRRMPERGSRQTLLFSATLSHRVLELAYEYMNEPEKLVVETETVTTTRIRQRIYFPA
AEEKIPLLLGLLSRSEGMRTMVFVNTKAFVEDVAHVLEKAGYRVGVLSGDVPQRKREVLL
NRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPIGAVTTELLVPVPRLERASEGKNDTIDKICPDTSDVLAA
PEWRRSSNRGKPRGSLGERDGRSRVGEVPRSDGGGGMRRRAKFRLEPERAPSVAAAGTSI
VATAPVLAVKAEIVSAAEQEGVHKPSRRRCGSGGSNHVAVAPAQVVAKPGSKPSLLGWIA
RRIRSLFDAI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaatcattgacaaatataaatttttattcatttgatctgcatccgatgttg
ctcgctgggctgacagatgcaggatttacactctgcactccgatccaggcgctaaccctt
ccgggtgcattagctggccgtgatatcgccggccaagctcaaacaggtaccgggaaaact
ttggcgtttttggtaacggtagttaatcgtttgctcagtcgttcggggttagtcaatcgc
aaacctgaagatccgcgtgcgttgattttggcgccaacacgtgagcttgcgattcaaatt
tataaggatgtgctgaagtttggtagcaatcttggcttgcgtttcgcgttaatttatgga
ggcgttgactacgacaagcaacgcgaactgttgcgcaaaggtgtggatgtgattattgcg
accccggggcgcttgattgattacgttaagcaacacaaggtagtttcgttgcacgcttgt
gagatctgtgtccttgatgaagctgatcggatgtttgacctgggttttatcaaggacatt
cgcttcatattgcggcgtatgccggagcgtggtagtcgccagactttactgttctcggca
actctcagtcaccgcgtattggagttggcctacgagtatatgaacgagccagagaagcta
gtggtggagacggagactgttactactacgcggatccgtcaacgtatctatttccccgct
gcagaggagaaaattccattgttgctgggcttgctctcgcgtagcgagggtatgcgtacc
atggtatttgtgaatacaaaagcgttcgttgaggatgtggcgcacgtgctggagaaggct
ggctaccgggtcggtgtgctgtccggagatgtgccgcagaggaagcgtgaagtcctgctc
aatcgtttccaaaaaggacaattggagatactggttgctacggacgtcgctgcacgtgga
ttgcacattgatggtgttaattacgtatacaactacgatctgccatttgatgctgaagat
tacgttcaccgtatcggtcgcactgcgcgtttgggggctgagggtgacgcgattagcttt
gcctgcgagcgttacgcgatgagtctgccggacattgaggcatacattgagcagaagatc
ccgatcggagcagtgactactgagttgctggtcccagtgccgcgtcttgaacgtgcatct
gagggtaagaatgatactattgataagatttgccctgatactagcgacgtgttagctgcc
ccggaatggcgtcgtagcagtaatcgaggtaagcctagaggcagccttggagaacgcgat
ggccgctcccgtgtaggtgaagtgcctagatcggatggaggaggtggtatgcgccgccgt
gctaaatttcgtttggagcccgagcgtgctcccagtgtggctgctgctgggactagtata
gttgcaaccgctcctgtacttgcagttaaggcggagatagtatctgctgcggagcaggag
ggggtgcataagcccagtcgtcggcgctgtggttcgggtggcagcaaccatgttgccgtc
gctccagctcaagtggttgccaagccaggtagcaaaccgtcgctgttaggttggatagcg
cgccgcatccgttcactgttcgatgcaatctaa
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