Xanthomonas vasicola pv. vasculorum: C7V42_01675
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Entry
C7V42_01675 CDS
T05388
Name
(GenBank) IS21 family transposase
Organism
xva
Xanthomonas vasicola pv. vasculorum
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_38
HTH_23
HTH_7
HTH_29
Sigma70_r4_2
HTH_11
HTH_Tnp_Tc3_1
HTH_IclR
TnsD
rve_3
HTH_28
HTH_DeoR
HTH_Tnp_ISL3
HTH_24
HTH_40
GerE
HTH_3
HTH_Tnp_Tc3_2
HTH_5
Phage_NinH
HTH_30
HTH_17
Sigma70_r4
HTH_31
GntR
MerR_1
MerR
DUF2089
TrmB
HTH_20
HTH_22
HTH_26
Sigma70_ECF
HTH_Tnp_1
HTH_36
GcrA
RPA_C
HTH_69
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AVQ05550
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Position
384110..385150
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AA seq
346 aa
AA seq
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MLTVEEQVEIKILARQGMSIREISRQLQVSRNTVRRYLREVAAAQRKPRGVRPHKLDPYR
SYIEQRVRAAYPAWLPATAIEQEIKLLGYRGGLSRLRQFMRSLRVIRPEEPLVRFETPAG
QQLQCDWIVFRRGKHPLSAFVATLGWSRASYVEFVTDEKLETLLACHAHTFAFFGGVSRQ
VLYDNMKTVVLERDAYGPGEHRFQPAFLDFAGHYGFVPKLCRPYRAKTKGKVERFNGYLR
RSFYNPLASKLAQDGLRLDADTANTAVLTWLRTTANARVHGTTGKVPQQQLQQERAALQG
LPSPYLGQLPKAAPPTQAAAPDWERFPRQSLQHELSVYEHLFAEVQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtagaggaacaagtggagatcaagatattggcccgacagggcatgagcatc
cgggagatatcccggcagttgcaggtatcgcgcaacacggtgcggcgttacctgcgcgag
gtggcagcggcccaacgcaaaccgcgtggtgttcgaccccacaagttagacccgtaccgg
tcctacattgagcagcgcgttcgcgcggcgtatccggcctggttgccggccacggcgatc
gagcaggagatcaagctgttgggctatcggggcggcttgtcacggttgcgccagttcatg
cgcagcctgcgtgtgatccgtccggaagagccgctggtgcgttttgagaccccggctggg
cagcagttgcagtgcgactggattgtgttccgacgcggcaaacatccgttgtcggcgttc
gtggccaccttggggtggtcccgggccagctacgtggagtttgtcaccgatgagaagctg
gagacgctgctggcgtgccacgcgcataccttcgcgttcttcggtggcgtgtcgcgccag
gtgctgtacgacaacatgaaaaccgtggtgttagaacgtgatgcatacggtccgggcgaa
catcgcttccagccggctttcctggactttgccgggcactacggcttcgtgcccaagctg
tgtcgaccgtatcgggccaagaccaaggggaaggtcgaacgcttcaacggttacctgcgg
cgcagtttctacaacccgttggcgtccaagttggcccaggacggtctacgcctggacgcc
gataccgccaatacggcggtgctgacgtggttgcgcaccacggccaatgcccgcgtgcat
ggcacgaccggaaaggtgccgcaacagcagttgcagcaagagcgcgcggcgctgcaaggt
ttgccatcgccctacctcggccagttgcccaaagcggccccgccgacccaagcggcggcg
ccggactgggaacgcttccctcgacagtccttgcagcacgagctgtcggtctacgaacac
ctgttcgcggaggtgcagtga
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