Xanthomonas vasicola pv. vasculorum: C7V42_03020
Help
Entry
C7V42_03020 CDS
T05388
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03030
DNA replication
xva03430
Mismatch repair
xva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7V42_03020
03430 Mismatch repair
C7V42_03020
03440 Homologous recombination
C7V42_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xva03032
]
C7V42_03020
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_03020
Enzymes [BR:
xva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7V42_03020
DNA replication proteins [BR:
xva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7V42_03020
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7V42_03020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AVQ05757
UniProt:
A0AAE8JX30
LinkDB
All DBs
Position
669404..669994
Genome browser
AA seq
196 aa
AA seq
DB search
MFDFELRDMVVVDTETTGVDPFVHDILSVGLVSMAKDYSEELYVQLPSNPIWSTFAENNF
LKFSSQWKKNAMPALDVVRSIERFVEACGNGREVIFVGHNFSFDRMFLQKLTKVAGVEKI
RGVSHRSIDTFTLLRSLSICGLVPEEAQTSDGAFKYFDIKIQGDARHTALADALATKILF
KKLLEILAGVSSSGKS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattttgaacttagagatatggtcgtagtcgataccgagacgacgggcgttgat
ccttttgtgcatgacatattatcagttgggcttgtttcgatggcgaaggactactctgaa
gagttatatgttcagcttccaagcaatccgatatggagcacatttgccgaaaataatttc
cttaagttcagttctcaatggaaaaaaaacgcaatgccagcccttgatgtggtgcgttca
attgaacgctttgtagaggcttgcggcaatggtcgtgaagtgatttttgtagggcataat
ttttcattcgaccgaatgtttctacaaaaactaacgaaagtcgcaggcgtcgaaaaaatt
cgtggtgtctctcaccgtagtatagataccttcacattattaaggtcgctttcgatatgt
gggctggttccagaggaggcccagacttcggatggtgcttttaagtattttgatatcaaa
atccagggggatgcccgtcataccgctctcgcggatgctttagctaccaagattcttttc
aagaaactgttggaaatattggccggagtttcgagctcaggtaagtcgtag
DBGET
integrated database retrieval system