Xanthomonas vasicola pv. vasculorum: C7V42_03400
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Entry
C7V42_03400 CDS
T05388
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00300
Lysine biosynthesis
xva00470
D-Amino acid metabolism
xva01100
Metabolic pathways
xva01110
Biosynthesis of secondary metabolites
xva01120
Microbial metabolism in diverse environments
xva01230
Biosynthesis of amino acids
Module
xva_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C7V42_03400
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C7V42_03400
Enzymes [BR:
xva01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C7V42_03400
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Paralog
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Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AVQ05813
UniProt:
A0AAE8F6C5
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Position
750044..750898
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AA seq
284 aa
AA seq
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MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAP
RSEGAVAAYGIWNCDGSAARQCGNGARCVAAWLVRDGTAQGEHFIIDSPVTAHAVEHLDG
GRYAVAMGIPQFEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVIEVGRVDAA
PVERVGTLLQQNAAFPNSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVRVSLPGGELRIRWPGDHEQVVMSGPAVFVFDGEWNG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaat
gatttcgtagtgctggacctgcgcgacggcacgccgccgccagatgccgctctggcagcg
cagttggccgaccgccacttcggggtgggctgcgatcagattctgaccatcgaagcgccg
cgcagcgaaggcgccgtggcggcctatggcatctggaattgcgatggctccgccgcacgc
caatgcggcaacggtgcgcgctgtgtcgccgcgtggctggtgcgcgatggcaccgcccag
ggcgagcatttcatcatcgatagtccggtcaccgcgcatgcggtcgagcaccttgacggc
ggccgctatgcggtggcgatgggcataccgcagttcgagcccacacagattccgctggcc
gggtttgcgcacgcacgcgacgaatatgcgctgccggtgcacggcgagaccgtgcgtttt
ggcgcagtgtcgatgggcaacccgcatgcggtgatcgaagtcggtcgcgtggatgcggca
ccggtcgagcgcgttggcacattgctgcagcagaacgccgcgtttcccaattcggtcaac
gtgggttttgtgcaggtggtcgaccctgcacatgtgcgtctgcgcgtgttcgagcgcggc
gttggcgaaacgctggcctgcggcagcggcgcctgtgcggctgcggtggtgctgatgcag
cgcggccgcgtcgagcgcgacgtgcgggtgtccttgccaggtggcgagctacgcattcgt
tggcccggcgaccacgagcaagtggtcatgtccggcccggcggtgttcgtcttcgatgga
gaatggaacggatga
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