Xanthomonas vasicola pv. vasculorum: C7V42_03835
Help
Entry
C7V42_03835 CDS
T05388
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
xva
Xanthomonas vasicola pv. vasculorum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_12
SPOB_a
Clathrin
Motif
Other DBs
NCBI-ProteinID:
AVQ05887
LinkDB
All DBs
Position
complement(846351..848393)
Genome browser
AA seq
680 aa
AA seq
DB search
MTVRKFPLAVCVCLTCATVTPGGHAATSSLGASRADRLAEISRYRDQARWIDALAAIERA
QSEQSDDALLYKLQTLTLSDIGNAWLAWQLCKARPDLFDQDQKAHLESNYLAKLVNWSLA
YGESEDTRLTEAEDALAQMEQYVQREARPPAQIPLRIRMDRLILLNRLGRHSQVRDEANA
LQREGHPLPDYVLPAVSDSTMATRQPAEAIPLLKTVLKNEPGRSQSRSQLVYAYLETEQA
EKAIDYLQSWQKDEPAWRWGGGKSRYANWARYEADLNMAMIHAYSGDLPTAQRALEGLLA
VGPGNGGLQTALGSVYQMRGWPRRALERHQMAYTLDPRDVSPRVGMYESYIQLQRDDLAR
PLHDSLLARYPNQPSVLHMDRDWRAHGGWQLQAAAEGSHSSSGGGNAPLGNNDQHYSMEA
DSPILDDRWRLFASADRRSVTFQNRYIAPLWLSGGVRYRFGHIDAEAAMAHPGDNIGQTG
LRASVGWQFNDQWHARMAAARNDAEASMQARISGITADSVALALDYTRDERMHWRLGGSQ
FRYDDGNRRDTISSAIEQRLLSQPRLLIDGLGSVYASRGSRDDAPYFNPSQDRSMELGLR
LNQQLWRHYERGFRQRLTVSVGDYWQQRYGSSLIPSVAYRHEWQLGQGRTFEYGASWSRP
VYDGRRERHLGVDAAMHWGE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcagaaaattccccctcgctgtctgcgtatgcctgacatgcgccacggttacg
cccgggggacacgcagccacctcaagcctcggcgcgtcgcgtgccgaccggcttgccgag
atcagccgttaccgcgatcaggctcgctggatcgacgcactcgccgcgatcgagcgagcc
caatcggaacaatccgacgacgccctgctgtacaagctgcagacgctgacgctgagcgac
atcggcaatgcctggctcgcctggcagttgtgcaaggcgcgcccggacctgtttgaccag
gaccagaaagcgcacctggagtcgaactatctggccaagctggtgaactggagtctggcc
tatggcgaaagcgaagacacccgtctgaccgaggccgaagacgcactggcgcagatggag
cagtacgtgcagcgcgaggcccgcccgccggcacagatacccctgcgcatccgcatggat
cgcctgatcctactcaaccgtctgggcaggcattcccaagtgcgtgacgaagcaaacgcc
ctgcaacgggaaggccatcccctccccgactatgtgctgccggcggtgagcgattcgacg
atggcgacccggcaaccggccgaagcgatcccactgctgaaaaccgtcctgaagaacgaa
ccggggcgctcccagtcacgctcgcagcttgtctacgcctacctggagaccgaacaggcg
gaaaaagcaatcgactacctgcaatcctggcagaaggacgagccagcgtggcgctggggc
ggcggcaagagccgctatgccaactgggcccgttacgaagccgacctgaacatggccatg
atccacgcctacagcggcgacctgcccaccgcgcagcgggcgctggaaggcctgctggcg
gtcggccccggcaacggcggcctgcagaccgcactgggcagtgtgtatcagatgcgtggt
tggccacgccgggcgctggaacggcatcagatggcctacacgctggacccgcgcgatgta
tcgccacgcgtcggcatgtacgaatcctatatccaattgcagcgcgacgacctggcccgc
cccctgcacgacagcctgctcgcccgctatcccaaccagccttccgtgctgcacatggac
cgcgactggcgcgcccacggtggctggcaactacaggccgccgccgaaggcagccacagt
tcgagcggcggcgggaacgcgccattgggcaataacgaccagcactacagcatggaagcg
gactcgccgatcctggacgaccgctggcgtctgttcgcctctgccgatcggcgctctgtc
acctttcagaaccgctacatcgcgcccttgtggctcagtggcggcgtgcgctatcgcttc
ggtcacattgatgccgaagccgccatggcgcatcccggcgacaacatcggacagaccggc
ctgcgcgccagtgttggctggcagttcaacgaccagtggcatgcccgcatggccgccgca
cgcaacgatgccgaagcctccatgcaggcgcgcatttcgggcatcaccgccgacagtgtg
gcgctggccctggactacacccgggacgaacgcatgcactggcggctgggcggcagtcag
ttccgttacgacgacggcaaccgccgcgacaccatcagcagcgccatagagcagcggcta
ctgagccagccacgcctgctcatcgatggcctgggcagcgtctacgccagccgcggcagt
cgcgatgatgcgccctatttcaacccttcgcaggaccgctcgatggagctcggtctgcgc
ctcaaccagcagctatggcgccactacgaacgcggcttccgccagcgcctgaccgtctcg
gtgggagactactggcagcagcgctacggcagctcgctgattcccagcgtggcctatcgc
cacgaatggcagctgggccagggccggacatttgaatacggtgcgagttggtcacgtccg
gtctatgacggccggcgcgaacgtcatctcggcgtcgatgccgcaatgcactggggagag
tga
DBGET
integrated database retrieval system
