Xanthomonas vasicola pv. vasculorum: C7V42_04135
Help
Entry
C7V42_04135 CDS
T05388
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva00260
Glycine, serine and threonine metabolism
xva00460
Cyanoamino acid metabolism
xva00630
Glyoxylate and dicarboxylate metabolism
xva00670
One carbon pool by folate
xva00680
Methane metabolism
xva01100
Metabolic pathways
xva01110
Biosynthesis of secondary metabolites
xva01120
Microbial metabolism in diverse environments
xva01200
Carbon metabolism
xva01230
Biosynthesis of amino acids
xva01240
Biosynthesis of cofactors
xva04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C7V42_04135 (glyA)
09102 Energy metabolism
00680 Methane metabolism
C7V42_04135 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C7V42_04135 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C7V42_04135 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C7V42_04135 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C7V42_04135 (glyA)
Enzymes [BR:
xva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C7V42_04135 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AVQ05934
UniProt:
A0AAE8F666
LinkDB
All DBs
Position
922845..924098
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDVRLETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRIKQVFDADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVNEQGLIDYEEVQRLATEHKPKMVVAGFSAYSQK
IDWGRFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMAN
TLIGRGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYKEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgatgtccgactggaaacctacgaccccgaactggctaaggccatcgct
gctgaagccggccgccaggaggatcacgtcgagctgatcgccagcgaaaactactgcagc
cccctggtgatggaagcccagggcagccagctgaccaataagtacgcagaaggctatccg
ggcaagcgctactacggtggctgcgaattcgtcgatattgccgagcagctggcgatcgac
cgcatcaagcaggtcttcgatgccgactatgcgaatgtgcagccgcacagtggttcgcag
gccaatcaggcggtgtatctggcgctgctgcagccgggcgacaccattctgggcatgagc
ctggcgcacggcggccacctgacccacggtgccaaggtcaacgtctccggcaagctgttc
aacgcagtgcaatatggcgtcaacgagcagggcctgatcgattacgaagaagtgcagcgc
cttgcgaccgagcacaagccgaagatggtggtggccggtttctctgcgtattcgcagaag
atcgattggggccgcttccgtgccattgccgacagcgtgggtgcctatctgttcgtggac
atggcccacatcgctggcctggtggccgctggggtgtatcccagcccgatggaacatgcg
cacgtggtgacgtcgaccacgcacaagacgctgcgtggcccgcgtggcggcatcatcgtg
gcaaagggcgccagcgaagagttgcagaagaagctgcagtcgatcgtgttccccggcatc
cagggcggcccgctgatgcacgtcatcgccgccaaagccgtcgcgtttaaggaagcgctg
gagccggcgttcaagacctaccagcaacaagtggtcaagaatgctcaggccatggccaat
acgctgattgggcgtggctacaagattgtctccggcggtaccgaaaaccatctgatgctg
gtcgatatgatcggccgcgacgtctccggcaaagatgccgaagccgcgctgggcaaggcg
cacatcaccgtcaacaagaacgccgtgcccaacgacccgcgctcgccgttcgttacttcc
ggcttgcgcctgggcaccccggcaatcaccacgcgcggttacaaggaacaggacagtatc
gatctggccaactggatcgccgacgtgctcgacgccccgaccgatgaggcggtgttggcg
aaagtgcgtgatgcagtgaccgcgcagtgcaagaaatatcctgtgtatggctga
DBGET
integrated database retrieval system