Xanthomonas vasicola pv. vasculorum: C7V42_05380
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Entry
C7V42_05380 CDS
T05388
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C7V42_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xva03021
]
C7V42_05380
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_05380
Enzymes [BR:
xva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C7V42_05380
Transcription machinery [BR:
xva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C7V42_05380
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C7V42_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AVQ06135
LinkDB
All DBs
Position
1161855..1162853
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgtgccaaggtcgtgatcgaacccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaaggtttgcaggaagacgtgcttgac
gtcctgctgaacctgaaagacgtggcaattcgtatgcacagtggcgacagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggcagacatcaggaccgatcacaac
gttgagatcatcaacggcgaccacgtgatctgccacctgaccaaagacaccgcattgaac
atgcgtctgaagatcgagcgtggtttcggctatcagccggctgctgcgcgtcgtcgtccg
gacgaagaaacccgcaccatcggtcgtttgatgttggatgcgtcgttctcgcccgtgcgt
cgcgttgcctatgccgtggaagctgcgcgtgttgaacagcgcaccgacctcgacaagctg
gtgatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatccttagcgatcagctgtcggtattcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgcccgatcgacgacctcgag
ctgaccgtgcgttcggccaattgcctcaaggccgagagcatctattacatcggcgatctg
attcagaagaccgaagtcgagctgctcaagaccccgaatctgggcaagaagtcgctaacc
gaaatcaaggaagtgctggcacagcgcggccttgcactgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgcttggttaa
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