Xanthomonas vasicola pv. vasculorum: C7V42_05480
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Entry
C7V42_05480 CDS
T05388
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xva02000
]
C7V42_05480
Transporters [BR:
xva02000
]
Other transporters
Pores ion channels [TC:
1
]
C7V42_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
DUF481
Autotransporter
DUF3575
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AVQ06152
UniProt:
A0AAE8F2W3
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All DBs
Position
1185423..1186520
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AA seq
365 aa
AA seq
DB search
MNKKILTAALLGGLAVAQAASAQEFDDRWYLTGSAGFNFQDSDRLTNDAPFVTLGLGKFV
SPNWSIDGELNYQNPNFDANQDLNWSQYGISFDLRRHFIQEGRGWNPYLLFGLGYQRSEE
EFDATPNPVSPGQQKDGNFAAKAGVGLQTTFDKRVAVRAELAYRADFNDQSVAAPREDWF
GDVLASVGVVIPLGPAPSTAPPPAPAPVAPSCADLDDDGDGVNNCDDKCPNSQPGQTIGP
DGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEATEILKRYPDLKVEVAGHTDSKGTDAY
NQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTE
LNVQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaattctcactgccgcgttgctcggcggtctggcagttgcccaggctgct
tccgcgcaggagttcgatgaccgttggtacctgaccggtagcgctggcttcaacttccag
gacagcgatcgcctgaccaatgatgccccgttcgtcaccctgggtctgggcaagttcgtc
agcccgaactggtcgatcgatggtgaactgaactatcagaacccgaacttcgatgccaac
caggatctgaactggagccagtacggcatctcgttcgatctgcgtcgccacttcatccag
gaaggccgcggctggaacccctacctgctgttcggtctgggctatcagcgttcggaagaa
gaattcgacgcgaccccgaacccggtgtccccgggccagcagaaggacggcaactttgcc
gccaaggctggtgtcggtctgcagaccaccttcgacaagcgcgtcgccgtgcgtgccgag
ttggcctaccgcgctgacttcaacgaccagagcgttgctgccccgcgcgaagactggttc
ggcgacgtgctggcttcggtcggcgtcgtgatcccgttgggacctgctccgtcgaccgct
ccgccgccggctccggctccggttgctccgagctgcgccgatctggatgacgacggtgac
ggcgtcaacaattgcgacgacaagtgcccgaactcgcagcctggccagaccattggtccg
gacggttgcccggttcctgtctcgatcgacctgaagggcgtgaacttcgacttcaacaag
tcgaccctgcgtccggatgcgatctcgatcttgagcgaagcgaccgaaatcctgaagcgt
taccccgacctgaaggtcgaggttgccggtcacaccgactcgaagggtaccgacgcgtac
aaccagaagctgtccgagcgtcgtgcgaccaccgtgtacgattacctgaccaagaacggc
gtcgatgcgtcgcgtctggtcggcccgatcggctacggcgagagccgtccgattgctccg
aacaccaacccggatggttctgacaatccggaaggtcgtgcgaagaaccgtcgtaccgag
ctgaacgtccagaactaa
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integrated database retrieval system
