Xanthomonas vasicola pv. vasculorum: C7V42_06760
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Entry
C7V42_06760 CDS
T05388
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
xva
Xanthomonas vasicola pv. vasculorum
Pathway
xva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7V42_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xva03400
]
C7V42_06760
DNA repair and recombination proteins [BR:
xva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7V42_06760
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7V42_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_23
AAA_16
RsgA_GTPase
AAA_25
nSTAND1
AAA_21
DnaJ_CXXCXGXG
nSTAND3
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AVQ06350
UniProt:
A0AAE8F5U8
LinkDB
All DBs
Position
complement(1457700..1460666)
Genome browser
AA seq
988 aa
AA seq
DB search
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLTQDQEQRYMLLAPVIRDRKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPALALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEICAQGTLQDILESPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
ESRARGYSPGRFSFNVRGGRCEACQGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLVVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVSGTPEDVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKVKPEKVAKVAKSATKKTAKKKAS
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgcctcgcgacaaattgatcgtgatcaccggcctgtccggctcgggcaagtcg
tcgttggcgttcgacaccatctatgcggaaggccagcgccgctacgtcgagtcgttgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccatatcgaaggc
ttgtcgccggcgatttcgatcgaacagaaatccacctcgcacaacccgcgctccacggtc
ggcacgatcactgagatctacgactacctgcgcctgctgtacgcacgcgtgggccagccg
cgctgcccggaccatggcttcccgctggaagcgcagaccgtcagccagatggtcgaccac
atgctcacccaggatcaggagcagcggtacatgctgctggccccagtgatccgcgaccgc
aagggcgagcatgcgcaggtgttcgaacaactgcgcgcacagggcttcgtgcgcgtgcgc
gtggacggcgagctgtacgaaatcgatgcggtgccggcattggcgctgcgccagaagcac
accatcgaagcggtgatcgaccgcttccgtccgcgcgaagacatcaagcagcgcctggcg
gaaagtttcgaaaccgcgctcaagctcggcgaaggcatggtggcggtgcaatcgctggac
gacccggcggcagcgccgcatctgttctcgtccaagtacagctgcccggtgtgcgattac
tcgttgccggagctggaaccgcggctgttttcgttcaatgcaccggtgggcgcctgcccg
agctgcgatggcctgggcgtggccgaattcttcgaccccgatcgcgtggtcgtgcatccc
gaactgtcgctgtcggccggcgcggtgcgcggttgggatcgacgcaatgcctattatttc
cagctgattgcctcgctggccaagcactacaagttcgatgtggatgcggtatggaacacg
ctgccggccaaggtgcgccaggcagtgctgttcggcagcggcgatgaggtgatcagcttc
acctactttaccgatgcgggcgggcgcaccacgcgcaagcatcgcttcgaaggcatcctg
ccgaacctggagcgccgttaccgcgaaaccgaatcgccggcggtgcgcgaagagctgacc
aagtacgtcagccagcagccctgccctgcctgcaacggcacgcgcttgaatcgcgctgcg
cgcaacgtgttcgtagccgatcgcccactgccggaactggtggtgcttccggtcaacgaa
gcgctgagttttttccgtggtttgtcgctgccgggttggcgcggcgagattgcggcaaag
attgtcaaggagatcggcgagcggctgggcttcctggtcgatgtgggcctggattacctc
accttggagcgcaaggccgacaccttgtccggtggtgaagcgcagcgcattcgcctggcc
agccagatcggcgccggcctggttggggtgatgtatgtactggacgagccgtcgatcggc
ttgcaccagcgcgacaacgaacgcctgctcggcacgctgacgcgattgcgcgatctgggc
aacaccgtgatcgtggtcgagcatgacgaagacgcgattcggctggccgaccacgtactg
gatatcggccccggtgccggcgtgcatggcggcgaaatctgcgcgcaaggaacgctgcag
gacattttggaatcgccacgttcgctcactggccaatacctgtcgggcaagcgtcgcatc
gagattcccaagcagcgccataagcccaacccgaagatgatgctgcatctgcgcggggcg
accggcaacaacttgaagaatgtcgacctggatattccggccggcttgctcacctgcatc
accggcgtgtccggctcgggcaagtcgacgctgatcaacgatacgttgttcacgctggcc
gccaacgaaatcaatggcgcctcgcatacagtggcaccgcatcgcgaagtcgaaaatctg
gacctgttcgacaaggtggtggatatcgaccagtcgccgatcgggcgcacaccgcgctcc
aatccggcgacctacaccggcatgtttaccccgttgcgcgagctgtttgcgcaggtgccg
gaatcgcgtgcacgcggttattcgccaggccgtttcagcttcaacgtacgtggcggccgc
tgcgaggcctgccagggcgacggcatgatcaaggtggagatgcacttcctgcccgacgtc
tacgtgccttgcgatgtctgccacggcaagcgctataaccgcgaaacgctggagatccgt
tacaagggtttcaacatcagcgacgtgctgcagatgaccgtggaagatgcgctgcgcctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaacgctggtcgatgtgggcttgagc
tacatcaagctgggccagagcgcgaccacactctccggcggtgaagcgcagcgcgtcaag
ctgtccaaggaactgtcgcgtcgcgataccgggcgcaccttgtacatcctggacgagccg
accaccggcctgcacttccacgatatcgaagcgttgctcgtcgtgctgcacaagctgcgc
gacgaaggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggattgtggatctgggtccggaaggcggccatcgcggcggtaccatcctggtctccggc
acgccggaagatgtggctgcacacaaggcgtcctacaccgggcagttcctggccaagatg
ctgccgtcagtgaaggcgcgcgagacgcggccggcggcaatggccaacaagcccgatgcg
cgcccgccgcgcaaggtcaaaccggagaaggtggccaaggtcgccaaatccgccaccaag
aagactgcaaagaagaaggcaagctga
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